RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 KCNK17Q96T54 332 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 BCO1Q9HAY6 547 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 ZNF835Q9Y2P0 537 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 DENRO43583 198 aaKnown RBP13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 TXNDC12O95881 172 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 HLA-DQA2P01906 255 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 QDPRP09417 244 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 GLI4P10075 376 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 GABRB1P18505 474 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 BMP5P22003 454 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 GNLYP22749 145 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 CDAP32320 146 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 MEP1BQ16820 701 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 LAIR2Q6ISS4 152 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 TMEM123Q8N131 208 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 OR6X1Q8NH79 312 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 SGCDQ92629 289 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 ZNF582Q96NG8 517 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 CRLF2Q9HC73 371 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 H2AFY2Q9P0M6 372 aaPredicted RBP13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 KLHL21Q9UJP4 597 aa13.63□□□□□ -0.23
PDLIM5-202ENST00000318007 IGKV3D-15A0A087WSY6 115 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 LOC102725191A0A1B0GVB3 256 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 A0A1W2PPL8 197 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 MBD3L4A6NDZ8 208 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 MBD3L3A6NE82 208 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 TVP23AA6NH52 213 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 MBD3L5A6NJ08 208 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 CD8B2A6NJW9 211 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 GPR171O14626 319 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 IDH3BO43837 385 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 C1QL1O75973 258 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 ZNF432O94892 652 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 MPZL1O95297 269 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 TMIGD3P0DMS9 266 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 APEHP13798 732 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 SPI1P17947 270 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 CDH11P55287 796 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 FOXG1P55316 489 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 EFNB1P98172 346 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 PIGFQ07326 219 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 SOWAHCQ53LP3 525 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 FAM214BQ7L5A3 538 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 LINGO2Q7L985 606 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 LUZP2Q86TE4 346 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 ADCK1Q86TW2 530 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 ZNF843Q8N446 348 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 MBD3L2Q8NHZ7 208 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 MCHR2Q969V1 340 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 APH1AQ96BI3 265 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 TM9SF2Q99805 663 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 RBM24Q9BX46 236 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 TTTY10Q9BZA0 68 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 ULBP2Q9BZM5 246 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 SEC61A2Q9H9S3 476 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 SLC7A10Q9NS82 523 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 COA3Q9Y2R0 106 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 ZNF462Q96JM2 2506 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 ARHGAP21Q5T5U3 1957 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 A6NIZ1 184 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 PTGES3LE9PB15 166 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 CCL21O00585 134 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 SLC43A1O75387 559 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 RPSAP08865 295 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 NAA10P41227 235 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 KIR2DL2P43627 348 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 CASP6P55212 293 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 RAP1BP61224 184 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 RAP1AP62834 184 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 FAPQ12884 760 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 IL18R1Q13478 541 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 MRPL13Q9BYD1 178 aaKnown RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 OPN3Q9H1Y3 402 aaPredicted RBP13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 CLN6Q9NWW5 311 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 GLTPQ9NZD2 209 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 EMC9Q9Y3B6 208 aa13.62□□□□□ -0.23
PDLIM5-202ENST00000318007 PHF3Q92576 2039 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-202ENST00000318007 PCNX1Q96RV3 2341 aa13.61□□□□□ -0.23
PDLIM5-202ENST00000318007 A0A0G2JNJ9 132 aa13.61□□□□□ -0.23
PDLIM5-202ENST00000318007 SS18L1O75177 396 aaPredicted RBP13.61□□□□□ -0.23
PDLIM5-202ENST00000318007 LRFN4Q6PJG9 635 aa13.61□□□□□ -0.23
PDLIM5-202ENST00000318007 GPR137CQ8N3F9 429 aa13.61□□□□□ -0.23
PDLIM5-202ENST00000318007 ZNF511Q8NB15 262 aa13.61□□□□□ -0.23
PDLIM5-202ENST00000318007 ADAD1Q96M93 576 aaKnown RBP13.61□□□□□ -0.23
PDLIM5-202ENST00000318007 UPB1Q9UBR1 384 aa13.61□□□□□ -0.23
PDLIM5-202ENST00000318007 Q9UFV3 132 aa13.61□□□□□ -0.23
PDLIM5-202ENST00000318007 LRCH1Q9Y2L9 728 aa13.61□□□□□ -0.23
PDLIM5-202ENST00000318007 INTS1Q8N201 2190 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 MYO7BQ6PIF6 2116 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 ZNF724A8MTY0 619 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 B8ZZF3 427 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 EEF1E1-BLOC1S5C9J1V9 151 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 EEF1E1O43324 174 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 AKAP8O43823 692 aaKnown RBP13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 FAM20BO75063 409 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 TNFSF13O75888 250 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 HCCSP53701 268 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 SF3B4Q15427 424 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 TSC22D1Q15714 1073 aa13.6□□□□□ -0.23
PDLIM5-202ENST00000318007 AADACL4Q5VUY2 407 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms