RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PGA4P0DJD7 388 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 PGA3P0DJD8 388 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 IGHV4-31P0DP07 118 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 APEHP13798 732 aaKnown RBP15.33■□□□□ 0.04
TPM1-203ENST00000317516 DAOP14920 347 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 TNFRSF1BP20333 461 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 OR1E2P47887 323 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 DAP3P51398 398 aaKnown RBP15.33■□□□□ 0.04
TPM1-203ENST00000317516 ZNF84P51523 738 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 SELENOWP63302 87 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 GUCY1A3Q02108 690 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 RPL18Q07020 188 aaKnown RBP15.33■□□□□ 0.04
TPM1-203ENST00000317516 ST3GAL3Q11203 375 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 RAB39AQ14964 217 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 NRN1LQ496H8 165 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 CYBRD1Q53TN4 286 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 CGB2Q6NT52 195 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 TMEM53Q6P2H8 277 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 NKAIN4Q8IVV8 208 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 TMEM255BQ8WV15 326 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 MRPL24Q96A35 216 aaKnown RBP15.33■□□□□ 0.04
TPM1-203ENST00000317516 TPD52L3Q96J77 140 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 BEX2Q9BXY8 128 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 RNF121Q9H920 327 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 INIPQ9NRY2 104 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 TMEM38BQ9NVV0 291 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 ZNF224Q9NZL3 707 aa15.33■□□□□ 0.04
TPM1-203ENST00000317516 SLC22A23A1A5C7 686 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 SYNGR3O43761 229 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 SHOX2O60902 331 aaPredicted RBP15.32■□□□□ 0.04
TPM1-203ENST00000317516 STAMBPO95630 424 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 F13BP05160 661 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 ADRA2AP08913 450 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 UGT2B15P54855 530 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 SLC36A2Q495M3 483 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 MICU2Q8IYU8 434 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 PFN4Q8NHR9 129 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 LIPHQ8WWY8 451 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 MDFIQ99750 246 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 KCNN2Q9H2S1 579 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 C1orf198Q9H425 327 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 SLC7A8Q9UHI5 535 aa15.32■□□□□ 0.04
TPM1-203ENST00000317516 M0R233 179 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 LMX1BO60663 402 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 CCDC22O60826 627 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 PATE4P0C8F1 98 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 FAM157CP0CG43 387 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 NR2C1P13056 603 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 ACADSP16219 412 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 AQP2P41181 271 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 SELENOVP59797 346 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 PLP2Q04941 152 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 HIST3H3Q16695 136 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 FAM166AQ6J272 317 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 SLC16A14Q7RTX9 510 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 CDK20Q8IZL9 346 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 ZCCHC24Q8N2G6 241 aaKnown RBP15.31■□□□□ 0.04
TPM1-203ENST00000317516 ZNF786Q8N393 782 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 OR4K5Q8NGD3 323 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 UBASH3BQ8TF42 649 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 MCHR2Q969V1 340 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 RCN3Q96D15 328 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 SH3GL3Q99963 347 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 MRPL13Q9BYD1 178 aaKnown RBP15.31■□□□□ 0.04
TPM1-203ENST00000317516 BPESC1Q9GZL8 116 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 SHARPINQ9H0F6 387 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 LRMDAQ9H2I8 198 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 MED4Q9NPJ6 270 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 ZNF446Q9NWS9 450 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 ARMCX1Q9P291 453 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 REV1Q9UBZ9 1251 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 KCNS2Q9ULS6 477 aa15.31■□□□□ 0.04
TPM1-203ENST00000317516 LOC100289279A0A1B0GTE1 492 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 ZNF23P17027 643 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 GIFP27352 417 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 TAF11Q15544 211 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 ARFGEF3Q5TH69 2177 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 SYT14Q8NB59 555 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 SLC30A7Q8NEW0 376 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 NOXO1Q8NFA2 376 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 OR1J2Q8NGS2 313 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 ASB10Q8WXI3 467 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 PRRC1Q96M27 445 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 ZNF347Q96SE7 839 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 HOPXQ9BPY8 73 aaPredicted RBP15.3■□□□□ 0.04
TPM1-203ENST00000317516 MRPL37Q9BZE1 423 aaKnown RBP15.3■□□□□ 0.04
TPM1-203ENST00000317516 EFCAB1Q9HAE3 211 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 C20orf141Q9NUB4 165 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 GPR160Q9UJ42 338 aa15.3■□□□□ 0.04
TPM1-203ENST00000317516 CR1P17927 2039 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 IGHV4-61A0A0C4DH41 118 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 IQCMA0A1B0GVH7 501 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 GMNCA6NCL1 334 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 NPIPB13A6NJU9 1138 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 NPIPB4C9JG80 1138 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 NDUFAB1O14561 156 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 GSTA4O15217 222 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 TRMUO75648 421 aaKnown RBP15.29■□□□□ 0.04
TPM1-203ENST00000317516 IFNW1P05000 195 aa15.29■□□□□ 0.04
TPM1-203ENST00000317516 ZNF16P17020 682 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms