RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 SLITRK2Q9H156 845 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 COPZ2Q9P299 210 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 COPS7AQ9UBW8 275 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 CLEC4AQ9UMR7 237 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 NUBP2Q9Y5Y2 271 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 OR6C76A6NM76 312 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 FAM171A2A8MVW0 826 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 CTDSPLO15194 276 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 GSTZ1O43708 216 aaPredicted RBP12.81□□□□□ -0.36
VRK3-201ENST00000316763 ICOSLGO75144 302 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 TNFSF15O95150 251 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 C1QBP02746 253 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 TFPIP10646 304 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 MAPK3P27361 379 aaPredicted RBP12.81□□□□□ -0.36
VRK3-201ENST00000316763 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
VRK3-201ENST00000316763 AGFG1P52594 562 aaKnown RBP12.81□□□□□ -0.36
VRK3-201ENST00000316763 EGR4Q05215 589 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 RPL18Q07020 188 aaKnown RBP12.81□□□□□ -0.36
VRK3-201ENST00000316763 FOXC1Q12948 553 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 EBPQ15125 230 aaKnown RBP12.81□□□□□ -0.36
VRK3-201ENST00000316763 ZNF684Q5T5D7 378 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 EXD3Q8N9H8 876 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 ZNF511Q8NB15 262 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 MR1Q95460 341 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 ZFP3Q96NJ6 502 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 WDR77Q9BQA1 342 aaPredicted RBP12.81□□□□□ -0.36
VRK3-201ENST00000316763 MESP1Q9BRJ9 268 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 CRB3Q9BUF7 120 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 MRI1Q9BV20 369 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 SPRY4Q9C004 299 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 SEMA4CQ9C0C4 833 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 MRPS7Q9Y2R9 242 aaKnown RBP12.81□□□□□ -0.36
VRK3-201ENST00000316763 WDFY3Q8IZQ1 3526 aa12.81□□□□□ -0.36
VRK3-201ENST00000316763 IGHV3-20A0A0C4DH32 117 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 TEX51A0A1B0GUA7 166 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 A0A1W2PQD3 144 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 C9orf172C9J069 976 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 HCRTR2O43614 444 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 CDC40O60508 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
VRK3-201ENST00000316763 KLF7O75840 302 aaPredicted RBP12.8□□□□□ -0.36
VRK3-201ENST00000316763 STK17BO94768 372 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 F13BP05160 661 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 PGCP20142 388 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 ITPKBP27987 946 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 GRPRP30550 384 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 GABREP78334 506 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 LTBQ06643 244 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 CAMK2BQ13554 666 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 SLC36A2Q495M3 483 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 SLC29A4Q7RTT9 530 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 SYT9Q86SS6 491 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 PRR22Q8IZ63 422 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 APCDD1LQ8NCL9 501 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 YIPF5Q969M3 257 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 KTI12Q96EK9 354 aaPredicted RBP12.8□□□□□ -0.36
VRK3-201ENST00000316763 CCDC86Q9H6F5 360 aaKnown RBP12.8□□□□□ -0.36
VRK3-201ENST00000316763 SRA1Q9HD15 236 aaKnown RBP12.8□□□□□ -0.36
VRK3-201ENST00000316763 MCUBQ9NWR8 336 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 GPN3Q9UHW5 284 aaPredicted RBP12.8□□□□□ -0.36
VRK3-201ENST00000316763 TMEM14AQ9Y6G1 99 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 TRAV36DV7A0A075B6V5 113 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 A0A0B4J203 849 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 TMEM72A0PK05 275 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 CENPBD1B2RD01 187 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 C9J4A7 227 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 AIPO00170 330 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 PHYHO14832 338 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 TO15178 435 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 NDUFB5O43674 189 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 SLC25A12O75746 678 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 ZNF432O94892 652 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 GP1BBP13224 206 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 MST1P26927 711 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 NR0B1P51843 470 aaKnown RBP12.8□□□□□ -0.36
VRK3-201ENST00000316763 ZNF117Q03924 483 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 PLCXD2Q0VAA5 305 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 FAPQ12884 760 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 ALKBH1Q13686 389 aaKnown RBP12.8□□□□□ -0.36
VRK3-201ENST00000316763 SLC22A10Q63ZE4 541 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 LYPD4Q6UWN0 246 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 CPEB2Q7Z5Q1 589 aaKnown RBP12.8□□□□□ -0.36
VRK3-201ENST00000316763 CDC20BQ86Y33 519 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 PLCZ1Q86YW0 608 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 ZNF441Q8N8Z8 693 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 OR5AK2Q8NH90 309 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 LGALS14Q8TCE9 139 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 TAAR8Q969N4 342 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 KLHL15Q96M94 604 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 DERL3Q96Q80 235 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 TBL1XR1Q9BZK7 514 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 WWTR1Q9GZV5 400 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 MED28Q9H204 178 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 GALNT9Q9HCQ5 603 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 LAMP5Q9UJQ1 280 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 KLK13Q9UKR3 277 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 PCDHGA9Q9Y5G4 932 aaKnown RBP12.8□□□□□ -0.36
VRK3-201ENST00000316763 V9GY05 133 aa12.8□□□□□ -0.36
VRK3-201ENST00000316763 SDK2Q58EX2 2172 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 IFITM5A6NNB3 132 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 HSPB2A8KAH6 182 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms