RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ZNF366Q8N895 744 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TMIGD2Q96BF3 282 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 LCORQ96JN0 433 aaPredicted RBP8.14□□□□□ -1.11
COL6A5-202ENST00000312481 EGLN3Q9H6Z9 239 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 LIN7CQ9NUP9 197 aaKnown RBP8.14□□□□□ -1.11
COL6A5-202ENST00000312481 POMT2Q9UKY4 750 aa8.14□□□□□ -1.11
COL6A5-202ENST00000312481 TCF20Q9UGU0 1960 aaKnown RBP8.13□□□□□ -1.11
COL6A5-202ENST00000312481 KIAA1549LQ6ZVL6 1849 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 TM4SF4P48230 202 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 NOVA1P51513 510 aaKnown RBP8.13□□□□□ -1.11
COL6A5-202ENST00000312481 EMP2P54851 167 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 HHEXQ03014 270 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 RUNX3Q13761 415 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 SUSD1Q6UWL2 747 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ZBTB46Q86UZ6 589 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 MMP21Q8N119 569 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 KLHDC1Q8N7A1 406 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 TRIM43Q96BQ3 446 aaPredicted RBP8.13□□□□□ -1.11
COL6A5-202ENST00000312481 SCMH1Q96GD3 660 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 MSLNLQ96KJ4 702 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 BCO1Q9HAY6 547 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 TRBV4-1A0A0J9YWV2 114 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 A0A1W2PPH5 198 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 OR5H14A6NHG9 310 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 MTCP1P56278 107 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 CAPNS2Q96L46 248 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 OR8D2Q9GZM6 311 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 PLXND1Q9Y4D7 1925 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 TIMP2P16035 220 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 SLC6A1P30531 599 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 RRADP55042 308 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 DLK1P80370 383 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 LRFN4Q6PJG9 635 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 KANSL1Q7Z3B3 1105 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF679Q8IYX0 411 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM229BQ8NBD8 167 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 GPX8Q8TED1 209 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 SLCO4A1Q96BD0 722 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 PTPN18Q99952 460 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 NOTCH3Q9UM47 2321 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 DUXBA0A1W2PPF3 345 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 POM121CA8CG34 1229 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ST8SIA3O43173 380 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 PPP1R3DO95685 299 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 SCGB1D2O95969 90 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 GDI1P31150 447 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ALDH3B1P43353 468 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 CCR5P51681 352 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 FOXA1P55317 472 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 HTR4Q13639 388 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 POMZP3Q6PJE2 187 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 LYPD4Q6UWN0 246 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 USP53Q70EK8 1073 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 MDGA1Q8NFP4 955 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 OR13C8Q8NGS7 320 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 LGALS14Q8TCE9 139 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 COQ3Q9NZJ6 369 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 PLCE1Q9P212 2302 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 DNPH1O43598 174 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 IL3RAP26951 378 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ENDOGQ14249 297 aaKnown RBP8.13□□□□□ -1.11
COL6A5-202ENST00000312481 TMEM128Q5BJH2 165 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ESX1Q8N693 406 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 OR4K13Q8NH42 304 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 MBOAT4Q96T53 435 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 LAT2Q9GZY6 243 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 PLEKHA3Q9HB20 300 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF160Q9HCG1 818 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 GKN1Q9NS71 199 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 HCFC1P51610 2035 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 LOC102723532A0A0G2JNH3 316 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 AIFM1O95831 613 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 LAP3P28838 519 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 PSMB3P49720 205 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 PHF19Q5T6S3 580 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 PLXDC2Q6UX71 529 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 TMPRSS11FQ6ZWK6 438 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 OR1S2Q8NGQ3 325 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 OR6S1Q8NH40 331 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 FGGYQ96C11 551 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ATF6BQ99941 703 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 NMNAT2Q9BZQ4 307 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 RAB18Q9NP72 206 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ALKBH4Q9NXW9 302 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 FABP7O15540 132 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 FOXD2O60548 495 aaPredicted RBP8.13□□□□□ -1.11
COL6A5-202ENST00000312481 PTAFRP25105 342 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF93P35789 620 aaPredicted RBP8.13□□□□□ -1.11
COL6A5-202ENST00000312481 EEF1A1P68104 462 aaKnown RBP8.13□□□□□ -1.11
COL6A5-202ENST00000312481 NAAAQ02083 359 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 EEF1A2Q05639 463 aaKnown RBP8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ZNF684Q5T5D7 378 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 EEF1A1P5Q5VTE0 462 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 RCBTB1Q8NDN9 531 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 IL17RDQ8NFM7 739 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 CASTOR1Q8WTX7 329 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 CYB5D2Q8WUJ1 264 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 ESAMQ96AP7 390 aa8.13□□□□□ -1.11
COL6A5-202ENST00000312481 SLC25A44Q96H78 314 aaPredicted RBP8.13□□□□□ -1.11
COL6A5-202ENST00000312481 CCDC85CA6NKD9 419 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms