RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ZNF519Q8TB69 540 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 MCUR1Q96AQ8 359 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 RSRC1Q96IZ7 334 aaKnown RBP10.48□□□□□ -0.73
SCFD1-201ENST00000311943 RADILQ96JH8 1075 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 ZNF75AQ96N20 296 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 RNF115Q9Y4L5 304 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 UGT2A1Q9Y4X1 527 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 PLCE1Q9P212 2302 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 A0A1W2PRG6 482 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 TNFRSF11BO00300 401 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 SOCS2O14508 198 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 ARHGEF9O43307 516 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 SOX14O95416 240 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 CD3EP07766 207 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 CECR9P0C854 216 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 CD79AP11912 226 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 IFNA8P32881 189 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 CLRN1P58418 232 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 PRPS1P60891 318 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 CD47Q08722 323 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 FLOT2Q14254 428 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 MSMPQ1L6U9 139 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 CLEC12AQ5QGZ9 265 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 OR7E24Q6IFN5 339 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 ZNF770Q6IQ21 691 aaPredicted RBP10.48□□□□□ -0.73
SCFD1-201ENST00000311943 ANKRD16Q6P6B7 361 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 SLC22A25Q6T423 547 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 ZNF584Q8IVC4 421 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 RNF113BQ8IZP6 322 aaKnown RBP10.48□□□□□ -0.73
SCFD1-201ENST00000311943 NOXO1Q8NFA2 376 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 OR8D4Q8NGM9 314 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 SAMD8Q96LT4 415 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 KCNK17Q96T54 332 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 NIPSNAP1Q9BPW8 284 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 OR10A4Q9H209 315 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 TXNIPQ9H3M7 391 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 FN3KQ9H479 309 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 RERGLQ9H628 205 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 IER3IP1Q9Y5U9 82 aa10.48□□□□□ -0.73
SCFD1-201ENST00000311943 ITPR3Q14573 2671 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 UNC119BA6NIH7 251 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 FAM171A2A8MVW0 826 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 DHHO43323 396 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 CD8AP01732 235 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 GIPRP48546 466 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 NR1H2P55055 460 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 RPL27P61353 136 aaKnown RBP10.47□□□□□ -0.73
SCFD1-201ENST00000311943 TGFBR3Q03167 851 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 TESK1Q15569 626 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 SLC35F1Q5T1Q4 408 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 VHLLQ6RSH7 139 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 PIWIL3Q7Z3Z3 882 aaKnown RBP10.47□□□□□ -0.73
SCFD1-201ENST00000311943 ARHGAP24Q8N264 748 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 PAQR4Q8N4S7 273 aaPredicted RBP10.47□□□□□ -0.73
SCFD1-201ENST00000311943 WFDC11Q8NEX6 87 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 ZNRF4Q8WWF5 429 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 PERPQ96FX8 193 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 LRGUKQ96M69 825 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 ESRP2Q9H6T0 727 aaKnown RBP10.47□□□□□ -0.73
SCFD1-201ENST00000311943 B3GNT2Q9NY97 397 aa10.47□□□□□ -0.73
SCFD1-201ENST00000311943 CISD1Q9NZ45 108 aaKnown RBP10.47□□□□□ -0.73
SCFD1-201ENST00000311943 DHRS12A0PJE2 317 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 TIPRLO75663 272 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 LY6HO94772 140 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 IGF2P01344 180 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 DANCRP0C864 163 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 CDKN2AP42771 156 aaKnown RBP10.46□□□□□ -0.73
SCFD1-201ENST00000311943 PTDSS1P48651 473 aaKnown RBP10.46□□□□□ -0.73
SCFD1-201ENST00000311943 UBE2NP61088 152 aaKnown RBP10.46□□□□□ -0.73
SCFD1-201ENST00000311943 CHRNB3Q05901 458 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 ZNF672Q499Z4 452 aaPredicted RBP10.46□□□□□ -0.73
SCFD1-201ENST00000311943 DNAL1Q4LDG9 190 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 C1orf162Q8NEQ5 155 aaPredicted RBP10.46□□□□□ -0.73
SCFD1-201ENST00000311943 IGFBPL1Q8WX77 278 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 LRR1Q96L50 414 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 OR51B6Q9H340 312 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 OR52D1Q9H346 318 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 ANKRD19PQ9H560 264 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 TMEM38BQ9NVV0 291 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 GDF2Q9UK05 429 aaPredicted RBP10.46□□□□□ -0.73
SCFD1-201ENST00000311943 POFUT2Q9Y2G5 429 aa10.46□□□□□ -0.73
SCFD1-201ENST00000311943 ARID1AO14497 2285 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 HS3ST1O14792 307 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 IGHG1P01857 330 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 RAF1P04049 648 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 TP53P04637 393 aaPredicted RBP10.46□□□□□ -0.74
SCFD1-201ENST00000311943 CTLA4P16410 223 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 ITGA2P17301 1181 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 RBMXP38159 391 aaKnown RBP10.46□□□□□ -0.74
SCFD1-201ENST00000311943 HGFACQ04756 655 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 CCNIQ14094 377 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 RAB39AQ14964 217 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 SPATS1Q496A3 300 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 OR2T5Q6IEZ7 315 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 C1orf94Q6P1W5 598 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 SMARCD3Q6STE5 483 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 LYPD4Q6UWN0 246 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.46□□□□□ -0.74
SCFD1-201ENST00000311943 LURAP1LQ8IV03 231 aa10.46□□□□□ -0.74
SCFD1-201ENST00000311943 CDK20Q8IZL9 346 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms