RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 USP51Q70EK9 711 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 ANKRD9Q96BM1 317 aaPredicted RBP12.14□□□□□ -0.47
SNED1-201ENST00000310397 LYRM4Q9HD34 91 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 HMGN4O00479 90 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 TBPP20226 339 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 FAM57BQ71RH2 274 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 PRR18Q8N4B5 295 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 OR52I2Q8NH67 350 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 SLC35E2P0CK97 266 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 TAGLN2P37802 199 aaKnown RBP12.14□□□□□ -0.47
SNED1-201ENST00000310397 SLC6A11P48066 632 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 SNTB1Q13884 538 aaKnown RBP12.14□□□□□ -0.47
SNED1-201ENST00000310397 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNED1-201ENST00000310397 SPNS1Q9H2V7 528 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 KLKB1P03952 638 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 SLC10A3P09131 477 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 RAB4AP20338 218 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 SLC6A12P48065 614 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 MRPL19P49406 292 aaKnown RBP12.14□□□□□ -0.47
SNED1-201ENST00000310397 CSNK1G2P78368 415 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 TPBGQ13641 420 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 NFATC4Q14934 902 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 MEP1BQ16820 701 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 PRSS45Q7RTY3 260 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 LIX1LQ8IVB5 337 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 C12orf76Q8N812 135 aaPredicted RBP12.14□□□□□ -0.47
SNED1-201ENST00000310397 ZNF740Q8NDX6 193 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 OR52H1Q8NGJ2 320 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 HDAC8Q9BY41 377 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 AHDC1Q5TGY3 1603 aaPredicted RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 MGMTP16455 207 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 BCKDHBP21953 392 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 ARRB2P32121 409 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 CAMK2BQ13554 666 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 SFRP5Q5T4F7 317 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 OR10R2Q8NGX6 335 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 OR4Q3Q8NH05 313 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 C14orf79Q96F83 325 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 LYSMD1Q96S90 227 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 STARD5Q9NSY2 213 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 C17orf112F2Z3M2 114 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 CST5P28325 142 aaPredicted RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 IAH1Q2TAA2 248 aaPredicted RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 ZNF836Q6ZNA1 936 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 CCDC190Q86UF4 302 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 IL1F10Q8WWZ1 152 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 OPALINQ96PE5 141 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 IGLV3-25P01717 112 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 MMP15P51511 669 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 RBM39Q14498 530 aaKnown RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 ZNF684Q5T5D7 378 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 METRNLQ641Q3 311 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 FGF20Q9NP95 211 aaPredicted RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 SLC39A9Q9NUM3 307 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 PURGQ9UJV8 347 aaKnown RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 A0A087WUU8 490 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 KITLGP21583 273 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 OR1D4P47884 311 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 SELENBP1Q13228 472 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 PAPOLGQ9BWT3 736 aaKnown RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 UFSP2Q9NUQ7 469 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 MCTS1Q9ULC4 181 aaKnown RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 APC2O95996 2303 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 MCRIP1C9JLW8 97 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 OR7C1O76099 320 aaPredicted RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 FABP5Q01469 135 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 TEX261Q6UWH6 196 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 NKX3-1Q99801 234 aaPredicted RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 ULBP2Q9BZM5 246 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 U3KQ87 197 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 ZNF808Q8N4W9 903 aaPredicted RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 OR13C9Q8NGT0 318 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 INSM2Q96T92 566 aaPredicted RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 RBM38Q9H0Z9 239 aaKnown RBP12.13□□□□□ -0.47
SNED1-201ENST00000310397 CHST2Q9Y4C5 530 aa12.13□□□□□ -0.47
SNED1-201ENST00000310397 LRP5LA4QPB2 252 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 ARGFXA6NJG6 315 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 CD79AP11912 226 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 LAP3P28838 519 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 ARHGAP11BQ3KRB8 267 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 PXDC1Q5TGL8 231 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 CST9LP1Q5W188 147 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 FCRL6Q6DN72 434 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 TCTN3Q6NUS6 607 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 SLC16A11Q8NCK7 471 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 SDSLQ96GA7 329 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 OR52A1Q9UKL2 312 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 MT-ND4LP03901 98 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 GALP22466 123 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 THBS3P49746 956 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 CLDN2P57739 230 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 AQP6Q13520 282 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 AFMIDQ63HM1 303 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 ACSM5Q6NUN0 579 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 TAS1R1Q7RTX1 841 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 TMEM179BQ7Z7N9 219 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 APH1BQ8WW43 257 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 NIT2Q9NQR4 276 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 PIAS3Q9Y6X2 628 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 OR2C1O95371 312 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms