RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CSF2RBP32927 897 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 MECP2P51608 486 aaKnown RBP9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 PGDP52209 483 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 RAB4BP61018 213 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 RAP2BP61225 183 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 EXOSC7Q15024 291 aaKnown RBP9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 FAM74A3Q4VXF1 159 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 OLFML2AQ68BL7 652 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 ATRAIDQ6UW56 229 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 GLDNQ6ZMI3 551 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 PRSS45Q7RTY3 260 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 CMTM4Q8IZR5 234 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 SYS1Q8N2H4 156 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZNF454Q8N9F8 522 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 MOSPD2Q8NHP6 518 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 GTF3AQ92664 365 aaKnown RBP9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 EDAQ92838 391 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 MMABQ96EY8 250 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 TCTN2Q96GX1 697 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 TMEM41AQ96HV5 264 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 CXorf58Q96LI9 332 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 MS4A4EQ96PG1 132 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 PAPOLGQ9BWT3 736 aaKnown RBP9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLC25A32Q9H2D1 315 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 PDE7BQ9NP56 450 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 PILRBQ9UKJ0 227 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 CLEC4AQ9UMR7 237 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 WDR45Q9Y484 360 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR2M5A3KFT3 312 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 L7N2F9 121 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 FMO6PO60774 539 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 AQP8O94778 261 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 OR2A4O95047 310 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 MRPL3P09001 348 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 CT62P0C5K7 136 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 CPMP14384 443 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 CXCL2P19875 107 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 PYCR1P32322 319 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 OR1D4P47884 311 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 BTG2P78543 158 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 CDK5R1Q15078 307 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 ZC3H14Q6PJT7 736 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 RPTNQ6XPR3 784 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 KANSL1Q7Z3B3 1105 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 CDK20Q8IZL9 346 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 SLC43A2Q8N370 569 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 RCBTB1Q8NDN9 531 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 OR13C5Q8NGS8 318 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 PFN4Q8NHR9 129 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 SMIM19Q96E16 107 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 OR2A7Q96R45 310 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 SEMA4CQ9C0C4 833 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 OR51V1Q9H2C8 321 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 AUNIPQ9H7T9 357 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 NRIP3Q9NQ35 241 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 TAS2R5Q9NYW4 299 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 DHCR7Q9UBM7 475 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 MGAT4CQ9UBM8 478 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 SIGLEC7Q9Y286 467 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 RAB19A4D1S5 217 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 TLCD2A6NGC4 264 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 SNRPGP15A8MWD9 76 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 TEX46H3BTG2 121 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 KRT33AO76009 404 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 TOXO94900 526 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 ALDOBP05062 364 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 ZNF806P0C7X5 589 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 PVALBP20472 110 aaPredicted RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 RPS4Y1P22090 263 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 MAPK3P27361 379 aaPredicted RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 EIF2S3P41091 472 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 FOXL2P58012 376 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 ACTA2P62736 377 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 ACTG2P63267 376 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 MRPS10P82664 201 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 OR1Q1Q15612 314 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 PRTGQ2VWP7 1150 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 PAN3Q58A45 887 aaKnown RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 SFRP4Q6FHJ7 346 aaPredicted RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 GUSBP11Q6P575 273 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 THSD4Q6ZMP0 1018 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 WDR88Q6ZMY6 472 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 TTLL10Q6ZVT0 673 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 ARHGEF39Q8N4T4 335 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 ZNF671Q8TAW3 534 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 LGALS14Q8TCE9 139 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 CDS1Q92903 461 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 CCDC74AQ96AQ1 378 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 CDCP1Q9H5V8 836 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 SEBOXQ9HB31 216 aaPredicted RBP9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 BEX1Q9HBH7 125 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 NKIRAS2Q9NYR9 191 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 KLHL9Q9P2J3 617 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 FLVCR2Q9UPI3 526 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 RCE1Q9Y256 329 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 CACNA1HO95180 2353 aa9.39□□□□□ -0.91
APOBEC3F-201ENST00000308521 LOC390937A0A1W2PQ73 354 aa9.38□□□□□ -0.91
APOBEC3F-201ENST00000308521 TMEM150CB9EJG8 249 aa9.38□□□□□ -0.91
APOBEC3F-201ENST00000308521 MCRIP1C9JLW8 97 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms