RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 LBHQ53QV2 105 aaPredicted RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 OR2T2Q6IF00 324 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 GLDNQ6ZMI3 551 aaPredicted RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 RABEPKQ7Z6M1 372 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 TRAM1L1Q8N609 369 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 AMER3Q8N944 861 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 CPEB3Q8NE35 698 aaKnown RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 LGALS14Q8TCE9 139 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 ASB16Q96NS5 453 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 NDC1Q9BTX1 674 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 MRPL37Q9BZE1 423 aaKnown RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 SYT4Q9H2B2 425 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 BRF2Q9HAW0 419 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 MRPL22Q9NWU5 206 aaKnown RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 FTSJ1Q9UET6 329 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 ZMIZ1Q9ULJ6 1067 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 SLC5A10A0PJK1 596 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 ZAR1LA6NP61 321 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 DCTDP32321 178 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 DHPSP49366 369 aaPredicted RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 SLC25A35Q3KQZ1 300 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 FAM98AQ8NCA5 519 aaKnown RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 LMLNQ96KR4 655 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 PHF7Q9BWX1 381 aaPredicted RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 IL36AQ9UHA7 158 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 MARCH11A6NNE9 402 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 RNASEK-C17orf49H0YIS7 233 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 PRODHO43272 600 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 LATO43561 262 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 B4GALT2O60909 372 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 EFEMP2O95967 443 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 CEBPBP17676 345 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 TRHRP34981 398 aaPredicted RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 RNF144AP50876 292 aaPredicted RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 TAS2R41P59536 307 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 SIM1P81133 766 aaPredicted RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 TNFRSF9Q07011 255 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 SYPL1Q16563 259 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 ENPP7Q6UWV6 458 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 ADCK2Q7Z695 626 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 SFTPA1Q8IWL2 248 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 PLA2G15Q8NCC3 412 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 ZNF582Q96NG8 517 aaPredicted RBP9.6□□□□□ -0.87
MSRB3-201ENST00000308259 PTCHD1Q96NR3 888 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 PTGES2Q9H7Z7 377 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 LHX9Q9NQ69 397 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 MAN2C1Q9NTJ4 1040 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 ZDHHC8Q9ULC8 765 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 PLXND1Q9Y4D7 1925 aa9.6□□□□□ -0.87
MSRB3-201ENST00000308259 FAM183AA6NL82 134 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 E9PQ18 207 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 PYCARD-AS1I3L0S3 204 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 LAMTOR5O43504 91 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 UGDHO60701 494 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 PTBP3O95758 552 aaKnown RBP9.59□□□□□ -0.87
MSRB3-201ENST00000308259 NR2F1P10589 423 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 BMP8BP34820 402 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 RPL4P36578 427 aaKnown RBP9.59□□□□□ -0.87
MSRB3-201ENST00000308259 ZNF239Q16600 458 aaKnown RBP9.59□□□□□ -0.87
MSRB3-201ENST00000308259 ZNF750Q32MQ0 723 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 C16orf54Q6UWD8 224 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 RD3Q7Z3Z2 195 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 KCNRGQ8N5I3 272 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 OR51S1Q8NGJ8 323 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 SLC6A18Q96N87 628 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 CPEB1Q9BZB8 566 aaKnown RBP9.59□□□□□ -0.87
MSRB3-201ENST00000308259 LAT2Q9GZY6 243 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 SLC2A9Q9NRM0 540 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 TAC3Q9UHF0 121 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 A0A1W2PPE2 198 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 OR5H14A6NHG9 310 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 HMSDA8MTL9 139 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 ARL6IP5O75915 188 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 OR12D1P0DN82 309 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 VIPR2P41587 438 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 RAB40BQ12829 278 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 TPBGQ13641 420 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 SLC9A3R2Q15599 337 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 RPE65Q16518 533 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 SYT14P1Q58G82 188 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 FAM71E1Q6IPT2 247 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 TCTN3Q6NUS6 607 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 FAM83HQ6ZRV2 1179 aaPredicted RBP9.59□□□□□ -0.87
MSRB3-201ENST00000308259 PARS2Q7L3T8 475 aaKnown RBP9.59□□□□□ -0.87
MSRB3-201ENST00000308259 ORAI3Q9BRQ5 295 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 PPIL1Q9Y3C6 166 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 NUMA1Q14980 2115 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 NPIPB8E9PQR5 432 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 H7BY64 318 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 OR13C7P0DN81 318 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 GIPRP48546 466 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 NUTF2P61970 127 aaKnown RBP9.59□□□□□ -0.87
MSRB3-201ENST00000308259 RAP1AP62834 184 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 VAMP3Q15836 100 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 ACSM3Q53FZ2 586 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 SLC7A13Q8TCU3 470 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 FAM3CQ92520 227 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 ZNF514Q96K75 400 aaPredicted RBP9.59□□□□□ -0.87
MSRB3-201ENST00000308259 PRAP1Q96NZ9 151 aa9.59□□□□□ -0.87
MSRB3-201ENST00000308259 INTS14Q96SY0 518 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms