RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 RAI1Q7Z5J4 1906 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ARPC4-TTLL3A0A0A6YYG9 625 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TEX13CA0A0J9YWL9 993 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 FAM221AA4D161 298 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PTP4A3O75365 173 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 UBL3O95164 117 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PPP1R3DO95685 299 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 GASTP01350 101 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 B4GALT1P15291 398 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 FASP25445 335 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 GUCA1AP43080 201 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 RUNX1T1Q06455 604 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 GABPB1Q06547 395 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 FHL1Q13642 323 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CCNIQ14094 377 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 RFX4Q33E94 735 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 THEM4Q5T1C6 240 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 NCMAPQ5T1S8 102 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 THSD4Q6ZMP0 1018 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 RASSF6Q6ZTQ3 369 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 YTHDF3Q7Z739 585 aaKnown RBP9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ADCK1Q86TW2 530 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CDC20BQ86Y33 519 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 WDFY1Q8IWB7 410 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 C10orf67Q8IYJ2 551 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TEX47Q8TBZ9 253 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 BCL2L2Q92843 193 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 MCHR2Q969V1 340 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 UTP4Q969X6 686 aaKnown RBP9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLCO4A1Q96BD0 722 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 RASD2Q96D21 266 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 BOD1Q96IK1 185 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 LURAP1Q96LR2 239 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SAMD8Q96LT4 415 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 Q96M85 177 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ERMAPQ96PL5 475 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 GPA33Q99795 319 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 BDH2Q9BUT1 245 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 DGCR6LQ9BY27 220 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 MRPL13Q9BYD1 178 aaKnown RBP9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 KCNN2Q9H2S1 579 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SMURF2Q9HAU4 748 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 NRIP3Q9NQ35 241 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ARMC1Q9NVT9 282 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 RNF115Q9Y4L5 304 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 IER3IP1Q9Y5U9 82 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CDH10Q9Y6N8 788 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 DSCAMO60469 2012 aa9.63□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 H3BN98 237 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 H7C1C5 153 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SOCS2O14508 198 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SIAH2O43255 324 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 AHCYL1O43865 530 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SLC2A10O95528 541 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 RAB36O95755 333 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 RENP00797 406 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CD79AP11912 226 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 APEHP13798 732 aaKnown RBP9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ZNF26P17031 533 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PTAFRP25105 342 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 IST1P53990 364 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 LCN6P62502 163 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TUBA1BP68363 451 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TUBA4AP68366 448 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 FMODQ06828 376 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 BSPH1Q075Z2 132 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 KPNB1Q14974 876 aaKnown RBP9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 HIST3H3Q16695 136 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 MESTQ5EB52 335 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 C10orf128Q5T292 105 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ZNF770Q6IQ21 691 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 DNM1P34Q6PK57 102 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ZNF704Q6ZNC4 412 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 TUBA1AQ71U36 451 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 FAM122BQ7Z309 247 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 DEPDC4Q8N2C3 294 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PIAS4Q8N2W9 510 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 CLDN22Q8N7P3 220 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 WDR31Q8NA23 367 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ATG16L2Q8NAA4 619 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 NSMAFQ92636 917 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 C1QTNF6Q9BXI9 259 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 NELFAQ9H3P2 528 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 DENND2DQ9H6A0 471 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 EGLN3Q9H6Z9 239 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 UBTD1Q9HAC8 227 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 NPAP1Q9NZP6 1156 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 POU2F3Q9UKI9 436 aa9.62□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ASH1LQ9NR48 2969 aaKnown RBP9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ADGRG4Q8IZF6 3080 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 A0A1W2PPL8 197 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 PRSS37A4D1T9 235 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ABCD4O14678 606 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 IMPA2O14732 288 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 IDH3BO43837 385 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 SOX14O95416 240 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 OR8G3PP0DMU2 310 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ANXA8P13928 327 aa9.61□□□□□ -0.87
CSPG4P1Y-201ENST00000306641 ZNF23P17027 643 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms