RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TOE1Q96GM8 510 aaKnown RBP12.16□□□□□ -0.46
DDX54-201ENST00000306014 SENP5Q96HI0 755 aaPredicted RBP12.16□□□□□ -0.46
DDX54-201ENST00000306014 SORCS2Q96PQ0 1159 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 SMIM3Q9BZL3 60 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 NARFLQ9H6Q4 476 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 EXOGQ9Y2C4 368 aaKnown RBP12.16□□□□□ -0.46
DDX54-201ENST00000306014 RNF215Q9Y6U7 377 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 TRAV1-2A0A0B4J238 106 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 OR2W5A6NFC9 320 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 CXCL3P19876 107 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 DAP3P51398 398 aaKnown RBP12.16□□□□□ -0.46
DDX54-201ENST00000306014 TPMTP51580 245 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 AKR1C2P52895 323 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 AKR1C1Q04828 323 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 ZNF770Q6IQ21 691 aaPredicted RBP12.16□□□□□ -0.46
DDX54-201ENST00000306014 SVBPQ8N300 66 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 MAP3K3Q99759 626 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 ZNF416Q9BWM5 594 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 TEX101Q9BY14 249 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 MYO16Q9Y6X6 1858 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 FAM221BA6H8Z2 402 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 NPIPA2E9PIF3 369 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 NPIPA3F8WFD2 350 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 HCRTR1O43613 425 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 FBXO24O75426 580 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 PMS2P2O95744 297 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 TSPAN15O95858 294 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 AGBL4Q5VU57 503 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 TCEAL6Q6IPX3 200 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 C17orf107Q6ZR85 190 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 RHOUQ7L0Q8 258 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 RCBTB1Q8NDN9 531 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 OR4N2Q8NGD1 307 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 STK35Q8TDR2 534 aa12.16□□□□□ -0.46
DDX54-201ENST00000306014 LSM2Q9Y333 95 aaKnown RBP12.16□□□□□ -0.46
DDX54-201ENST00000306014 DVL2O14641 736 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 DUX1O43812 170 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 SUSD5O60279 629 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 PXNP49023 591 aaPredicted RBP12.15□□□□□ -0.46
DDX54-201ENST00000306014 CAMLGP49069 296 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 GNMTQ14749 295 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 RSC1A1Q92681 617 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 DDIT4LQ96D03 193 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 SLC25A21Q9BQT8 299 aaPredicted RBP12.15□□□□□ -0.46
DDX54-201ENST00000306014 WFDC6Q9BQY6 131 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 AIFM2Q9BRQ8 373 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 HIF3AQ9Y2N7 669 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 ANK1P16157 1881 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 P2RY10O00398 339 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 BRINP1O60477 761 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 S100A2P29034 98 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 P2RX1P51575 399 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 CLDN6P56747 220 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 FXYD4P59646 89 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 MCEMP1Q8IX19 187 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 PTDSS2Q9BVG9 487 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 LCTP09848 1927 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 TRIM64BA6NI03 449 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 GALR3O60755 368 aaPredicted RBP12.15□□□□□ -0.46
DDX54-201ENST00000306014 CD3DP04234 171 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 TSC22D1Q15714 1073 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 RNLSQ5VYX0 342 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 C3orf33Q6P1S2 294 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 LRRC69Q6ZNQ3 347 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 TMPRSS11FQ6ZWK6 438 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 SLC5A7Q9GZV3 580 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 SERGEFQ9UGK8 458 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 ATPIF1Q9UII2 106 aa12.15□□□□□ -0.46
DDX54-201ENST00000306014 UBE3DQ7Z6J8 389 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 OR4K15Q8NH41 348 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 C8orf33Q9H7E9 229 aaPredicted RBP12.14□□□□□ -0.47
DDX54-201ENST00000306014 DHCR7Q9UBM7 475 aaKnown RBP12.14□□□□□ -0.47
DDX54-201ENST00000306014 C1orf196B1AJZ1 125 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 LANCL1O43813 399 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 TRAPPC6AO75865 159 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 GALP22466 123 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 PPP2CBP62714 309 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 PPP2CAP67775 309 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 MLF2Q15773 248 aaPredicted RBP12.14□□□□□ -0.47
DDX54-201ENST00000306014 GSG1Q2KHT4 349 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 TCTN1Q2MV58 587 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 ALKBH2Q6NS38 261 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 OR2AK2Q8NG84 335 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 PNPLA2Q96AD5 504 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 LRRC46Q96FV0 321 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 OR5B2Q96R09 309 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 LPAR4Q99677 370 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 DLL4Q9NR61 685 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 TAS2R5Q9NYW4 299 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 POMT2Q9UKY4 750 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 TRIOBPQ9H2D6 2365 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 GGT3PA6NGU5 568 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 IDSB3KWA1 339 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 SERPINA5P05154 406 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 OR8U9P0C7N5 309 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 SNU13P55769 128 aaKnown RBP12.14□□□□□ -0.47
DDX54-201ENST00000306014 BTG2P78543 158 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 PRSS53Q2L4Q9 553 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 CLLU1Q5K131 121 aa12.14□□□□□ -0.47
DDX54-201ENST00000306014 PLXDC1Q8IUK5 500 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms