RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ZNF676Q8N7Q3 588 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 OR56B4Q8NH76 319 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 NSMAFQ92636 917 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 RBPMSQ93062 196 aaKnown RBP11.69□□□□□ -0.54
HIF3A-204ENST00000300862 HIST1H2ACQ93077 130 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 PPP1R14AQ96A00 147 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 ZNF285Q96NJ3 590 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 SEC22CQ9BRL7 303 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 CHIAQ9BZP6 476 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 SEMA4CQ9C0C4 833 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 CUTCQ9NTM9 273 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 COPZ2Q9P299 210 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 KCNG2Q9UJ96 466 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 FOXJ3Q9UPW0 622 aa11.69□□□□□ -0.54
HIF3A-204ENST00000300862 COL4A2P08572 1712 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 A0A1W2PPL8 197 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 TMEM150CB9EJG8 249 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 ARPC1BO15143 372 aaKnown RBP11.68□□□□□ -0.54
HIF3A-204ENST00000300862 CTDSPLO15194 276 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 IGLV3-19P01714 112 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 HLA-DQA2P01906 255 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 MAP2K6P52564 334 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 CHMP1BQ7LBR1 199 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 CDC20BQ86Y33 519 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 OR2G2Q8NGZ5 317 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 ADAMTS18Q8TE60 1221 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 FCAMRQ8WWV6 532 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 S100A16Q96FQ6 103 aaKnown RBP11.68□□□□□ -0.54
HIF3A-204ENST00000300862 LCORQ96JN0 433 aaPredicted RBP11.68□□□□□ -0.54
HIF3A-204ENST00000300862 NUDT9Q9BW91 350 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 KCNK15Q9H427 330 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 METTL17Q9H7H0 456 aaPredicted RBP11.68□□□□□ -0.54
HIF3A-204ENST00000300862 SCP2D1Q9UJQ7 156 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 TSPAN4O14817 238 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 KRT33AO76009 404 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 DDAH2O95865 285 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 RORAP35398 523 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 P2RX1P51575 399 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 RPL6Q02878 288 aaKnown RBP11.68□□□□□ -0.54
HIF3A-204ENST00000300862 C1orf189Q5VU69 101 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 SLC25A25Q6KCM7 469 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 LRRN1Q6UXK5 716 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 BAIAP2L2Q6UXY1 529 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 SHISA6Q6ZSJ9 500 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 GLB1L2Q8IW92 636 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 OR2T35Q8NGX2 323 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 TMEM106AQ96A25 262 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 CCDC74AQ96AQ1 378 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 KLHL9Q9P2J3 617 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 GTF2A1LQ9UNN4 478 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 NPTNQ9Y639 398 aa11.68□□□□□ -0.54
HIF3A-204ENST00000300862 IGHV1OR15-9A0A0B4J2B8 117 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 BLACEA4D250 179 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 OR4C45A6NMZ5 311 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 H0YIG0 161 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 GABARAPH6UMI1 98 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 TSPAN9O75954 239 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ACSM4P0C7M7 580 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ALOX5APP20292 161 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 PSMB1P20618 241 aaKnown RBP11.67□□□□□ -0.54
HIF3A-204ENST00000300862 RAD52P43351 418 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 HYAL4Q2M3T9 481 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 SLC6A19Q695T7 634 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 TMEM81Q6P7N7 255 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 FGD2Q7Z6J4 655 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 LRRTM1Q86UE6 522 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 DND1Q8IYX4 353 aaKnown RBP11.67□□□□□ -0.54
HIF3A-204ENST00000300862 PRSS35Q8N3Z0 413 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 FTMTQ8N4E7 242 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 TSTD1Q8NFU3 115 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ZNF721Q8TF20 911 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 PHYHIPQ92561 330 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ADIPOR1Q96A54 375 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 KLHL15Q96M94 604 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 SLC46A1Q96NT5 459 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 GSX2Q9BZM3 304 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 SLITRK2Q9H156 845 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 MOKQ9UQ07 419 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 SLC6A5Q9Y345 797 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 TLCD2A6NGC4 264 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ANXA2P2A6NMY6 339 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 DOK2O60496 412 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ANXA2P07355 339 aaKnown RBP11.67□□□□□ -0.54
HIF3A-204ENST00000300862 NME1P15531 152 aaKnown RBP11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ANXA7P20073 488 aaKnown RBP11.67□□□□□ -0.54
HIF3A-204ENST00000300862 CXCR1P25024 350 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ADH7P40394 386 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ART1P52961 327 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 OR1D5P58170 312 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ETFDHQ16134 617 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 SEZ6L2Q6UXD5 910 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 NLRC3Q7RTR2 1065 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ZBTB44Q8NCP5 570 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 LIPHQ8WWY8 451 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 LINC00052Q96N35 136 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 AIFM2Q9BRQ8 373 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 ZNF436Q9C0F3 470 aaPredicted RBP11.67□□□□□ -0.54
HIF3A-204ENST00000300862 PPA2Q9H2U2 334 aa11.67□□□□□ -0.54
HIF3A-204ENST00000300862 RDH8Q9NYR8 311 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms