RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 BPIFB2Q8N4F0 458 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 CHST4Q8NCG5 386 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 NPEPL1Q8NDH3 523 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 ZBTB8AQ96BR9 441 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 C10orf90Q96M02 699 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 CMKLR1Q99788 373 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 MBD2Q9UBB5 411 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 CTSFQ9UBX1 484 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 MRM2Q9UI43 246 aaKnown RBP13.35□□□□□ -0.27
COL6A2-201ENST00000300527 P2RX6O15547 441 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 HNRNPA1L2Q32P51 320 aaKnown RBP13.35□□□□□ -0.27
COL6A2-201ENST00000300527 JMJD6Q6NYC1 403 aaPredicted RBP13.35□□□□□ -0.27
COL6A2-201ENST00000300527 FOXRED2Q8IWF2 684 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 JAGN1Q8N5M9 183 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 TMEM52Q8NDY8 209 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 ZNF629Q9UEG4 869 aaPredicted RBP13.35□□□□□ -0.27
COL6A2-201ENST00000300527 SLC22A13Q9Y226 551 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 MTCL1Q9Y4B5 1905 aaKnown RBP13.35□□□□□ -0.27
COL6A2-201ENST00000300527 MPTX1A8MV57 137 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 HIDE1A8MVS5 230 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 SLC31A1O15431 190 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 EFEMP2O95967 443 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 ADH1AP07327 375 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 PPM1FP49593 454 aaPredicted RBP13.34□□□□□ -0.27
COL6A2-201ENST00000300527 CTXN1P60606 82 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 ADAM8P78325 824 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 DPTQ07507 201 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 DHRS2Q13268 280 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 CDNFQ49AH0 187 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 ENPP7Q6UWV6 458 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 OR52R1Q8NGF1 315 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 OR2L8Q8NGY9 312 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 KXD1Q9BQD3 176 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 PIGMQ9H3S5 423 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 TAS2R8Q9NYW2 309 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 DEC1Q9P2X7 70 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 MKL2Q9ULH7 1088 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 DCTN6O00399 190 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 RNGTTO60942 597 aaKnown RBP13.34□□□□□ -0.27
COL6A2-201ENST00000300527 CYB5AP00167 134 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 S100A9P06702 114 aaKnown RBP13.34□□□□□ -0.27
COL6A2-201ENST00000300527 PLAURQ03405 335 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 NR0B2Q15466 257 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 RAB11BQ15907 218 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 PAN3Q58A45 887 aaKnown RBP13.34□□□□□ -0.27
COL6A2-201ENST00000300527 FAM209BQ5JX69 171 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 RBMS3Q6XE24 437 aaKnown RBP13.34□□□□□ -0.27
COL6A2-201ENST00000300527 EIF4E3Q8N5X7 224 aaKnown RBP13.34□□□□□ -0.27
COL6A2-201ENST00000300527 FAM3DQ96BQ1 224 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 SLC6A7Q99884 636 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 POTEKPQ9BYX7 375 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 WDR76Q9H967 626 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 UPB1Q9UBR1 384 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 BCL2L11O43521 198 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 OR2T1O43869 369 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 S100A6P06703 90 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 ITGA5P08648 1049 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 ADCYAP1P18509 176 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 MAPK3P27361 379 aaPredicted RBP13.34□□□□□ -0.27
COL6A2-201ENST00000300527 CDRT4Q8N9R6 151 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 MFSD9Q8NBP5 474 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 ACBD4Q8NC06 268 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 DCUN1D4Q92564 292 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 GAREM1Q9H706 876 aa13.34□□□□□ -0.27
COL6A2-201ENST00000300527 TMEM235A6NFC5 223 aa13.33□□□□□ -0.27
COL6A2-201ENST00000300527 ACTL6AO96019 429 aa13.33□□□□□ -0.27
COL6A2-201ENST00000300527 MAP3K8P41279 467 aa13.33□□□□□ -0.27
COL6A2-201ENST00000300527 CXADRP78310 365 aa13.33□□□□□ -0.27
COL6A2-201ENST00000300527 AIMP2Q13155 320 aaKnown RBP13.33□□□□□ -0.27
COL6A2-201ENST00000300527 C11orf87Q6NUJ2 197 aa13.33□□□□□ -0.27
COL6A2-201ENST00000300527 MOB3CQ70IA8 216 aa13.33□□□□□ -0.27
COL6A2-201ENST00000300527 ZNF765Q7L2R6 523 aa13.33□□□□□ -0.27
COL6A2-201ENST00000300527 CCDC74AQ96AQ1 378 aa13.33□□□□□ -0.27
COL6A2-201ENST00000300527 SELENOIQ9C0D9 397 aa13.33□□□□□ -0.27
COL6A2-201ENST00000300527 PITHD1Q9GZP4 211 aaPredicted RBP13.33□□□□□ -0.27
COL6A2-201ENST00000300527 NIT2Q9NQR4 276 aa13.33□□□□□ -0.27
COL6A2-201ENST00000300527 ENTPD2Q9Y5L3 495 aa13.33□□□□□ -0.27
COL6A2-201ENST00000300527 PLXNA2O75051 1894 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 TRBV23-1A0A0A0MS06 115 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 EDDM13A0A1B0GTR0 161 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 CDC40O60508 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL6A2-201ENST00000300527 PLGP00747 810 aaPredicted RBP13.33□□□□□ -0.28
COL6A2-201ENST00000300527 ACRP10323 421 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 SREBF2Q12772 1141 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 IRF4Q15306 451 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 BIVMQ86UB2 503 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 RXFP4Q8TDU9 374 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 C15orf40Q8WUR7 153 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 SFT2D1Q8WV19 159 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 FAM46BQ96A09 425 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 TBC1D3DA0A087WVF3 549 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 TBC1D3IA0A087WXS9 549 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 A0A1W2PP55 124 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 CPED1A4D0V7 1026 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 ZNF736B4DX44 427 aaPredicted RBP13.33□□□□□ -0.28
COL6A2-201ENST00000300527 TBC1D3LB9A6J9 549 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 C11orf98E9PRG8 122 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 TXNL1O43396 289 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 TBC1D3HP0C7X1 549 aa13.33□□□□□ -0.28
COL6A2-201ENST00000300527 PGAM2P15259 253 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms