RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 A0A1W2PQY0 241 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 ELOA3DA6NLF2 546 aaPredicted RBP11.85□□□□□ -0.51
TVP23A-201ENST00000299866 LDB3O75112 727 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 FGF18O76093 207 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 TACSTD2P09758 323 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 EMDP50402 254 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 SKP1P63208 163 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 MESP2Q0VG99 397 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 SREBF2Q12772 1141 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 PEA15Q15121 130 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 IRF4Q15306 451 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 ELOA3BQ3SY89 546 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 C3orf33Q6P1S2 294 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 ELOA3Q8NG57 546 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 OR4A4PQ8NGN8 299 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 PHOSPHO1Q8TCT1 267 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 TRIM43Q96BQ3 446 aaPredicted RBP11.85□□□□□ -0.51
TVP23A-201ENST00000299866 SELENOIQ9C0D9 397 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 ALX4Q9H161 411 aaPredicted RBP11.85□□□□□ -0.51
TVP23A-201ENST00000299866 OR1A2Q9Y585 309 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 A0A1B0GTQ1 180 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 NDUFS6O75380 124 aaKnown RBP11.84□□□□□ -0.51
TVP23A-201ENST00000299866 PRNPP04156 253 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 C8AP07357 584 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 SLC25A4P12235 298 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 PGAM2P15259 253 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 LAG3P18627 525 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 AIMP2Q13155 320 aaKnown RBP11.84□□□□□ -0.51
TVP23A-201ENST00000299866 PGAP1Q75T13 922 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 NAA40Q86UY6 237 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 BPIFB2Q8N4F0 458 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 OR5AP2Q8NGF4 316 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 TSEN15Q8WW01 171 aaKnown RBP11.84□□□□□ -0.51
TVP23A-201ENST00000299866 TMEM74BQ9NUR3 256 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 UQCC1Q9NVA1 299 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 HCFC2Q9Y5Z7 792 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 SNRNP200O75643 2136 aaKnown RBP11.84□□□□□ -0.51
TVP23A-201ENST00000299866 GRXCR1A8MXD5 290 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 TXNL1O43396 289 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 ITGA5P08648 1049 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 RD3LP0DJH9 198 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 PBX2P40425 430 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 TAS2R19P59542 299 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 HABP2Q14520 560 aaPredicted RBP11.84□□□□□ -0.51
TVP23A-201ENST00000299866 CEBPEQ15744 281 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 ETV3LQ6ZN32 361 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 RNF44Q7L0R7 432 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 FAM3DQ96BQ1 224 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 MIOXQ9UGB7 285 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 TINAGQ9UJW2 476 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 CARHSP1Q9Y2V2 147 aaKnown RBP11.84□□□□□ -0.51
TVP23A-201ENST00000299866 ENTPD2Q9Y5L3 495 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 A0A1B0GTI1 187 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 BLOC1S5-TXNDC5H3BN57 136 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 UPK3AO75631 287 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 ABOP16442 354 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 PPT1P50897 306 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 DPTQ07507 201 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 NKAPLQ5M9Q1 402 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF813Q6ZN06 617 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 OR2L3Q8NG85 312 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 OR4S1Q8NGB4 309 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 OR52E1Q8NGJ3 308 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 ASB13Q8WXK3 278 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 C3orf49Q96BT1 292 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF558Q96NG5 402 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF251Q9BRH9 671 aa11.84□□□□□ -0.51
TVP23A-201ENST00000299866 C5orf51A6NDU8 294 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 H7C1C5 153 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 AGPAT2O15120 278 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 ZNF208O43345 1280 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 CDC40O60508 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
TVP23A-201ENST00000299866 SRPX2O60687 465 aaPredicted RBP11.83□□□□□ -0.52
TVP23A-201ENST00000299866 VAMP1P23763 118 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 ACTBP60709 375 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 LCN6P62502 163 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 ACTG1P63261 375 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 GFOD2Q3B7J2 385 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 SLC39A5Q6ZMH5 540 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 ZNF765Q7L2R6 523 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 C10orf53Q8N6V4 93 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 PLPP7Q8NBV4 271 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 ZNF417Q8TAU3 575 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 C14orf79Q96F83 325 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 MANSC4A6NHS7 340 aaPredicted RBP11.83□□□□□ -0.52
TVP23A-201ENST00000299866 GLCEO94923 617 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 RPS4Y1P22090 263 aaKnown RBP11.83□□□□□ -0.52
TVP23A-201ENST00000299866 CCKBRP32239 447 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 CDKN2AP42771 156 aaKnown RBP11.83□□□□□ -0.52
TVP23A-201ENST00000299866 CDK3Q00526 305 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 RAB11BQ15907 218 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 DMBX1Q8NFW5 382 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 GPX8Q8TED1 209 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 SEH1LQ96EE3 360 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 SLC25A21Q9BQT8 299 aaPredicted RBP11.83□□□□□ -0.52
TVP23A-201ENST00000299866 COMMD4Q9H0A8 199 aa11.83□□□□□ -0.52
TVP23A-201ENST00000299866 MKKSQ9NPJ1 570 aaPredicted RBP11.83□□□□□ -0.52
TVP23A-201ENST00000299866 TTLL8A6PVC2 850 aa11.82□□□□□ -0.52
TVP23A-201ENST00000299866 SMIM6P0DI80 62 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms