RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 APOC1P02654 83 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 HPXP02790 462 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 FBXO45P0C2W1 286 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 RAB3AP20336 220 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 CSF2RBP32927 897 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 DGCR2P98153 550 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 LGALS3BPQ08380 585 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 BIKQ13323 160 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ST3GAL2Q16842 350 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ALG10Q5BKT4 473 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 GPR139Q6DWJ6 353 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ELP2Q6IA86 826 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 LRRC69Q6ZNQ3 347 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 SIAH3Q8IW03 269 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF687Q8N1G0 1237 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 SLC25A45Q8N413 288 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF615Q8N8J6 731 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 RELL2Q8NC24 303 aaPredicted RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 DNAAF1Q8NEP3 725 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 TRMT10AQ8TBZ6 339 aaKnown RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 CREB3L1Q96BA8 519 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 SYT4Q9H2B2 425 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 UBQLN4Q9NRR5 601 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 MRPS18AQ9NVS2 196 aaKnown RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 PCDHGB7Q9Y5F8 929 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 OR6C65A6NJZ3 312 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF264O43296 627 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 HIST1H2ABP04908 130 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 GPR143P51810 404 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 SLC6A19Q695T7 634 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 HIST3H2AQ7L7L0 130 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 OR4D10Q8NGI6 311 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 DUSP19Q8WTR2 217 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 HIST1H2ACQ93077 130 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 PELI1Q96FA3 418 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 DERL3Q96Q80 235 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 ABHD1Q96SE0 405 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 GINS4Q9BRT9 223 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 LMF2Q9BU23 707 aaKnown RBP9.18□□□□□ -0.94
FOXN4-201ENST00000299162 EDARQ9UNE0 448 aa9.18□□□□□ -0.94
FOXN4-201ENST00000299162 A0A087WUJ7 227 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 IGHV1OR21-1A0A087WYE8 117 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 RPS10-NUDT3A0A1W2PQS6 291 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 hCG_1807616A0A1W2PRN6 198 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 PMS2P1A4D2B8 440 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 PDCD5O14737 125 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 SLC25A12O75746 678 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 H2AFB2P0C5Z0 115 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 RRASP10301 218 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 TFPIP10646 304 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 SPI1P17947 270 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 CXCR1P25024 350 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 RORAP35398 523 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 TSPAN7P41732 249 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 SLC37A1P57057 533 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 HSD11B2P80365 405 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 SMAD4Q13485 552 aaKnown RBP9.17□□□□□ -0.94
FOXN4-201ENST00000299162 OPCMLQ14982 345 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 TMEM44Q2T9K0 475 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 TCTE1Q5JU00 501 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 COL13A1Q5TAT6 717 aaPredicted RBP9.17□□□□□ -0.94
FOXN4-201ENST00000299162 CYB5R2Q6BCY4 276 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 SFXN4Q6P4A7 337 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 C11orf88Q6PI97 169 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 DPY19L4Q7Z388 723 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 DMRTC2Q8IXT2 367 aaPredicted RBP9.17□□□□□ -0.94
FOXN4-201ENST00000299162 MEIOBQ8N635 442 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 BMPERQ8N8U9 685 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 DUSP18Q8NEJ0 188 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 ADAD1Q96M93 576 aaKnown RBP9.17□□□□□ -0.94
FOXN4-201ENST00000299162 GPR137Q96N19 417 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 ARL6Q9H0F7 186 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 GSN-AS1Q9NRJ2 163 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 COPZ2Q9P299 210 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 MGAT4CQ9UBM8 478 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 GRHPRQ9UBQ7 328 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 PRODH2Q9UF12 536 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 RIF1Q5UIP0 2472 aaKnown RBP9.17□□□□□ -0.94
FOXN4-201ENST00000299162 GPR171O14626 319 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 CFIP05156 583 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 F8A1P23610 371 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 VEGFCP49767 419 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 COL28A1Q2UY09 1125 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 LINGO2Q7L985 606 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 ALG12Q9BV10 488 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 MLXQ9UH92 298 aa9.17□□□□□ -0.94
FOXN4-201ENST00000299162 H3BML4 177 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 DUX1O43812 170 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 BPIFB3P59826 476 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 ZNF117Q03924 483 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 SNTB2Q13425 540 aaKnown RBP9.16□□□□□ -0.94
FOXN4-201ENST00000299162 FHL1Q13642 323 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 TFAP2EQ6VUC0 442 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 C3P1Q6ZMU1 363 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 KRT77Q7Z794 578 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 ARHGEF39Q8N4T4 335 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 LPAR4Q99677 370 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 HEXA-AS1Q9H8Q6 139 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 WDR76Q9H967 626 aa9.16□□□□□ -0.94
FOXN4-201ENST00000299162 LANCL2Q9NS86 450 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms