RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 CASP12Q6UXS9 341 aa15.82■□□□□ 0.12
CCDC78-201ENST00000293889 CREB3L2Q70SY1 520 aa15.82■□□□□ 0.12
CCDC78-201ENST00000293889 SLC35D2Q76EJ3 337 aa15.82■□□□□ 0.12
CCDC78-201ENST00000293889 RASD2Q96D21 266 aa15.82■□□□□ 0.12
CCDC78-201ENST00000293889 TEX12Q9BXU0 123 aa15.82■□□□□ 0.12
CCDC78-201ENST00000293889 MED29Q9NX70 200 aa15.82■□□□□ 0.12
CCDC78-201ENST00000293889 GRHPRQ9UBQ7 328 aa15.82■□□□□ 0.12
CCDC78-201ENST00000293889 ING1Q9UK53 422 aaPredicted RBP15.82■□□□□ 0.12
CCDC78-201ENST00000293889 RNF6Q9Y252 685 aa15.82■□□□□ 0.12
CCDC78-201ENST00000293889 ZNF835Q9Y2P0 537 aa15.82■□□□□ 0.12
CCDC78-201ENST00000293889 TEX13CA0A0J9YWL9 993 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 NPIPB13A6NJU9 1138 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 NPIPB4C9JG80 1138 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 PYCARD-AS1I3L0S3 204 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 M0R3G1 203 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 IMPA2O14732 288 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 SURF4O15260 269 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 SLC2A10O95528 541 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 HMGN1P05114 100 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 HIST1H1CP16403 213 aaKnown RBP15.81■□□□□ 0.12
CCDC78-201ENST00000293889 GABRB1P18505 474 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 SDHAP31040 664 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 SLC16A1P53985 500 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 CDC42P60953 191 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 TUBA1BP68363 451 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 MELKQ14680 651 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 SNAPC1Q16533 368 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 ZNF362Q5T0B9 420 aaPredicted RBP15.81■□□□□ 0.12
CCDC78-201ENST00000293889 EEF1A1P5Q5VTE0 462 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 GPR139Q6DWJ6 353 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 TUBA1AQ71U36 451 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 WDFY1Q8IWB7 410 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 ARIH2OSQ8N7S6 290 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 ZIC4Q8N9L1 334 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 ZNF775Q96BV0 537 aaPredicted RBP15.81■□□□□ 0.12
CCDC78-201ENST00000293889 PMF1-BGLAPU3KQ54 211 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 ALPK2Q86TB3 2170 aa15.81■□□□□ 0.12
CCDC78-201ENST00000293889 PRKYO43930 277 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 SLC19A2O60779 497 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 WDR1O75083 606 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 GABRA1P14867 456 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 DAP3P51398 398 aaKnown RBP15.8■□□□□ 0.12
CCDC78-201ENST00000293889 ARMC4Q5T2S8 1044 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 RTL6Q6ICC9 239 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 RPTNQ6XPR3 784 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 DEPDC4Q8N2C3 294 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 OR4K13Q8NH42 304 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 ZNF519Q8TB69 540 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 ASB10Q8WXI3 467 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 MYDGFQ969H8 173 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 ZNF385AQ96PM9 386 aaKnown RBP15.8■□□□□ 0.12
CCDC78-201ENST00000293889 SLC38A2Q96QD8 506 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 EMC6Q9BV81 110 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 CALHM2Q9HA72 323 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 CMC2Q9NRP2 79 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 IMPAD1Q9NX62 359 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 ZNF226Q9NYT6 803 aa15.8■□□□□ 0.12
CCDC78-201ENST00000293889 IGKV3D-15A0A087WSY6 115 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 FIGNL2A6NMB9 653 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 PRRG2O14669 202 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 FCGR2AP12318 317 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 PLA2G2AP14555 144 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 ACVR1BP36896 505 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 PCYT1AP49585 367 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 BIDP55957 195 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 CLDN17P56750 224 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 EFNB1P98172 346 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 RBPJQ06330 500 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 ITGADQ13349 1161 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 KRR1Q13601 381 aaKnown RBP15.79■□□□□ 0.12
CCDC78-201ENST00000293889 RNPS1Q15287 305 aaKnown RBP15.79■□□□□ 0.12
CCDC78-201ENST00000293889 SF3B4Q15427 424 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCDC78-201ENST00000293889 SMN1Q16637 294 aaKnown RBP15.79■□□□□ 0.12
CCDC78-201ENST00000293889 MESTQ5EB52 335 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 NSUN5P2Q63ZY6 315 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 P4HA3Q7Z4N8 544 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 DOLPP1Q86YN1 238 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 TCEANCQ8N8B7 351 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 OR52E2Q8NGJ4 325 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 WNT2BQ93097 391 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 LGALS12Q96DT0 336 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 IL4I1Q96RQ9 567 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 PRRG3Q9BZD7 231 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 SLIRPQ9GZT3 109 aaKnown RBP15.79■□□□□ 0.12
CCDC78-201ENST00000293889 RNF122Q9H9V4 155 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 CHCHD3Q9NX63 227 aaKnown RBP15.79■□□□□ 0.12
CCDC78-201ENST00000293889 KLHL9Q9P2J3 617 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 CLEC4AQ9UMR7 237 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 GPR52Q9Y2T5 361 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 FLVCR1Q9Y5Y0 555 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 CD8B2A6NJW9 211 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 RIIAD1A6NNX1 92 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 CDK1P06493 297 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 PSMB9P28065 219 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 PTGER4P35408 488 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 CDKN2AP42771 156 aaKnown RBP15.79■□□□□ 0.12
CCDC78-201ENST00000293889 RUNX1T1Q06455 604 aa15.79■□□□□ 0.12
CCDC78-201ENST00000293889 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCDC78-201ENST00000293889 MRPL49Q13405 166 aaKnown RBP15.79■□□□□ 0.12
CCDC78-201ENST00000293889 IRF3Q14653 427 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms