RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 SKA3Q8IX90 412 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 ICA1LQ8NDH6 482 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 SLC30A7Q8NEW0 376 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 CLDND2Q8NHS1 167 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 FGFBP3Q8TAT2 258 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 SNX33Q8WV41 574 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 RDH5Q92781 318 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 HIST1H2ACQ93077 130 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 SLC25A44Q96H78 314 aaPredicted RBP10.96□□□□□ -0.65
CD44-203ENST00000278386 SH3GL3Q99963 347 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 ZNF275Q9NSD4 429 aaPredicted RBP10.96□□□□□ -0.65
CD44-203ENST00000278386 TMEM38BQ9NVV0 291 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 ZNF229Q9UJW7 825 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 TRIM33Q9UPN9 1127 aa10.96□□□□□ -0.65
CD44-203ENST00000278386 B4DSR2 109 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 DHHO43323 396 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 PPIHO43447 177 aaKnown RBP10.95□□□□□ -0.66
CD44-203ENST00000278386 NCR1O76036 304 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 IGHG1P01857 330 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 TFP02787 698 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 THY1P04216 161 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 SERPINA5P05154 406 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 LCKP06239 509 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 CCL2P13500 99 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 PCGF2P35227 344 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 ZNF84P51523 738 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 SELENOVP59797 346 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 MYBPC1Q00872 1141 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 ZP4Q12836 540 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 TBC1D28Q2M2D7 210 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 INTS11Q5TA45 600 aaKnown RBP10.95□□□□□ -0.66
CD44-203ENST00000278386 SHQ1Q6PI26 577 aaKnown RBP10.95□□□□□ -0.66
CD44-203ENST00000278386 LINC00114Q6XXX2 140 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 SLC16A14Q7RTX9 510 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 RETREG3Q86VR2 466 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 CARM1Q86X55 608 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 ZNF584Q8IVC4 421 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 DPP10Q8N608 796 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 LRRC17Q8N6Y2 441 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 NOXO1Q8NFA2 376 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 OR4K5Q8NGD3 323 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 OR4D11Q8NGI4 311 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 TAMM41Q96BW9 452 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 C1orf159Q96HA4 380 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 MPP4Q96JB8 637 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 C1orf198Q9H425 327 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 METTL17Q9H7H0 456 aaPredicted RBP10.95□□□□□ -0.66
CD44-203ENST00000278386 INTS9Q9NV88 658 aaKnown RBP10.95□□□□□ -0.66
CD44-203ENST00000278386 TAS2R5Q9NYW4 299 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 TAAR3PQ9P1P4 343 aa10.95□□□□□ -0.66
CD44-203ENST00000278386 A0A1W2PRG6 482 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 SLC22A23A1A5C7 686 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 BLOC1S5-TXNDC5H3BN57 136 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 LYPD3O95274 346 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 BCL10O95999 233 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 QDPRP09417 244 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 PGA4P0DJD7 388 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 PGA3P0DJD8 388 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 COL8A2P25067 703 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 KLF3P57682 345 aaPredicted RBP10.94□□□□□ -0.66
CD44-203ENST00000278386 SLC36A2Q495M3 483 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 TMEM154Q6P9G4 183 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 HDDC2Q7Z4H3 204 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 TSPYL5Q86VY4 417 aaPredicted RBP10.94□□□□□ -0.66
CD44-203ENST00000278386 PAQR4Q8N4S7 273 aaPredicted RBP10.94□□□□□ -0.66
CD44-203ENST00000278386 RBM15BQ8NDT2 890 aaKnown RBP10.94□□□□□ -0.66
CD44-203ENST00000278386 OR10A6Q8NH74 314 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 RASSF5Q8WWW0 418 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 YIPF5Q969M3 257 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 ZNF347Q96SE7 839 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 ZNF416Q9BWM5 594 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 SLC19A3Q9BZV2 496 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 OCEL1Q9H607 264 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 ZNF385DQ9H6B1 395 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 NPHS2Q9NP85 383 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 GPR160Q9UJ42 338 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 METRNQ9UJH8 293 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 GRIP1Q9Y3R0 1128 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 TANC2Q9HCD6 1990 aa10.94□□□□□ -0.66
CD44-203ENST00000278386 IQCMA0A1B0GVH7 501 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 FAM157AC9JC47 383 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 TPD52L2O43399 206 aaKnown RBP10.93□□□□□ -0.66
CD44-203ENST00000278386 CLPTM1O96005 669 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 PTHP01270 115 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 F13BP05160 661 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 MSMBP08118 114 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 ASAH2BP0C7U1 165 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 APLNRP35414 380 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 MAGEB1P43366 347 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 TAS2R41P59536 307 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 ERVS71-1P61550 626 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 HSF2Q03933 536 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 GLO1Q04760 184 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 PLP2Q04941 152 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 LRFN4Q6PJG9 635 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 THSD4Q6ZMP0 1018 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 DEF8Q6ZN54 512 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 DPPA2Q7Z7J5 298 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 LRRC18Q8N456 261 aa10.93□□□□□ -0.66
CD44-203ENST00000278386 SYT14Q8NB59 555 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms