RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 MUCL1Q96DR8 90 aa16.58■□□□□ 0.25
COL5A3-201ENST00000264828 NECAP2Q9NVZ3 263 aa16.58■□□□□ 0.25
COL5A3-201ENST00000264828 ZNF26P17031 533 aaPredicted RBP16.58■□□□□ 0.25
COL5A3-201ENST00000264828 RPS19P39019 145 aaKnown RBP16.58■□□□□ 0.25
COL5A3-201ENST00000264828 DPY19L2P2Q6ZN68 376 aa16.58■□□□□ 0.25
COL5A3-201ENST00000264828 DCXRQ7Z4W1 244 aa16.58■□□□□ 0.25
COL5A3-201ENST00000264828 SLC51BQ86UW2 128 aa16.58■□□□□ 0.25
COL5A3-201ENST00000264828 WDR5BQ86VZ2 330 aa16.58■□□□□ 0.25
COL5A3-201ENST00000264828 OR52A1Q9UKL2 312 aa16.58■□□□□ 0.25
COL5A3-201ENST00000264828 ETV7Q9Y603 341 aa16.58■□□□□ 0.25
COL5A3-201ENST00000264828 OR8U8P0C7N1 319 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 HCCSP53701 268 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 GABREP78334 506 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 RNF151Q2KHN1 245 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 YOD1Q5VVQ6 348 aaPredicted RBP16.58■□□□□ 0.24
COL5A3-201ENST00000264828 CHST8Q9H2A9 424 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 DHCR7Q9UBM7 475 aaKnown RBP16.58■□□□□ 0.24
COL5A3-201ENST00000264828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 ACOT8O14734 319 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 TNFRSF4P43489 277 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 CD300LGQ6UXG3 332 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 TMEM182Q6ZP80 229 aaPredicted RBP16.58■□□□□ 0.24
COL5A3-201ENST00000264828 MARC2Q969Z3 335 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 BANF2Q9H503 90 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 TAF9BQ9HBM6 251 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 A8MVM7 634 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 EFSO43281 561 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 SIGLEC6O43699 453 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 CD46P15529 392 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 ETV6P41212 452 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 SSR4P51571 173 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 EDDM3BP56851 147 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 ALKAL1Q6UXT8 129 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 OR11L1Q8NGX0 322 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 ARRDC3Q96B67 414 aa16.58■□□□□ 0.24
COL5A3-201ENST00000264828 HCRTR1O43613 425 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 FABP6P51161 128 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 SLC35A1P78382 337 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 ZMAT1Q5H9K5 638 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 KCTD11Q693B1 232 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 C15orf54Q8N8G6 183 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 DUSP23Q9BVJ7 150 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 GABARAPH6UMI1 98 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 GABARAPO95166 117 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 ZNF92Q03936 586 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 CST9Q5W186 159 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 RBM45Q8IUH3 476 aaKnown RBP16.57■□□□□ 0.24
COL5A3-201ENST00000264828 KLHDC9Q8NEP7 349 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 MS4A8Q9BY19 250 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 XRCC3O43542 346 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 TRAF3IP2O43734 574 aaPredicted RBP16.57■□□□□ 0.24
COL5A3-201ENST00000264828 CDONQ4KMG0 1287 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 SYT13Q7L8C5 426 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 S100A7AQ86SG5 101 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 LILRA3Q8N6C8 439 aaPredicted RBP16.57■□□□□ 0.24
COL5A3-201ENST00000264828 MRPL43Q8N983 215 aaKnown RBP16.57■□□□□ 0.24
COL5A3-201ENST00000264828 TM7SF3Q9NS93 570 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 TAS2R5Q9NYW4 299 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 DNMT3BQ9UBC3 853 aaKnown RBP16.57■□□□□ 0.24
COL5A3-201ENST00000264828 BCAT2O15382 392 aaPredicted RBP16.57■□□□□ 0.24
COL5A3-201ENST00000264828 ABHD16AO95870 558 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 ATP1B1P05026 303 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 THBS1P07996 1170 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 HNF1AP20823 631 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 PSMB3P49720 205 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 EDDM3AQ14507 147 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 UBTD2Q8WUN7 234 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 ZIC5Q96T25 663 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 PMS2P2O95744 297 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 DPPA2Q7Z7J5 298 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 ST8SIA2Q92186 375 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 GPR160Q9UJ42 338 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 CCL26Q9Y258 94 aa16.57■□□□□ 0.24
COL5A3-201ENST00000264828 RAB19A4D1S5 217 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 MLF1P58340 268 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 LRRC26Q2I0M4 334 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 CCSMST1Q4G0I0 132 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 NEURL3Q96EH8 262 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 ANKRD10Q9NXR5 420 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 NME2P1O60361 137 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 BCL6P41182 706 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 CARD18P57730 90 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 ZNF266Q14584 549 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 KDM4DQ6B0I6 523 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 FAM58AQ8N1B3 248 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 KCNRGQ8N5I3 272 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 SFT2D1Q8WV19 159 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 C12orf49Q9H741 205 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 PAQR9Q6ZVX9 377 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 NANPQ8TBE9 248 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 SCARB1Q8WTV0 552 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 PRSS16Q9NQE7 514 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 TMEM184BQ9Y519 407 aaPredicted RBP16.56■□□□□ 0.24
COL5A3-201ENST00000264828 TOGARAM1Q9Y4F4 1720 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 TRDV1A0A1B0GX56 115 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 HLA-HP01893 362 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 GSTP1P09211 210 aaKnown RBP16.56■□□□□ 0.24
COL5A3-201ENST00000264828 ENPP1P22413 925 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 ETV1P50549 477 aa16.56■□□□□ 0.24
COL5A3-201ENST00000264828 LPCAT3Q6P1A2 487 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms