RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 RAB11FIP5Q9BXF6 653 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 POTEKPQ9BYX7 375 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 TRPV4Q9HBA0 871 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 LHX6Q9UPM6 363 aa13.63□□□□□ -0.23
XRCC1-201ENST00000262887 DDX6P26196 483 aaKnown RBP eCLIP13.62□□□□□ -0.23
XRCC1-201ENST00000262887 RBM34P42696 430 aaKnown RBP13.62□□□□□ -0.23
XRCC1-201ENST00000262887 PNLIPRP2P54317 469 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 GXYLT1Q4G148 440 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF684Q5T5D7 378 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 UNQ6126/PRO20091Q6UXV3 157 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 PPP1R1CQ8WVI7 109 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 FGF13Q92913 245 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 TREM1Q9NP99 234 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.62□□□□□ -0.23
XRCC1-201ENST00000262887 RXFP3Q9NSD7 469 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 FRRS1LQ9P0K9 344 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 FBXO4Q9UKT5 387 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 NOP16Q9Y3C1 178 aaKnown RBP13.62□□□□□ -0.23
XRCC1-201ENST00000262887 TICRRQ7Z2Z1 1910 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 SCN5AQ14524 2016 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 TRBV5-5A0A0J9YX44 114 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 OR52A4PA6NMU1 304 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 SULT2B1O00204 365 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 CCSO14618 274 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 RAB3DO95716 219 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 WNT11O96014 354 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 ATP1B3P54709 279 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 ACTBP60709 375 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 ACTG1P63261 375 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 SSBP1Q04837 148 aaKnown RBP13.62□□□□□ -0.23
XRCC1-201ENST00000262887 INPP5JQ15735 1006 aaPredicted RBP13.62□□□□□ -0.23
XRCC1-201ENST00000262887 TMEM52BQ4KMG9 183 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 FNDC3BQ53EP0 1204 aaKnown RBP13.62□□□□□ -0.23
XRCC1-201ENST00000262887 INO80EQ8NBZ0 244 aaPredicted RBP13.62□□□□□ -0.23
XRCC1-201ENST00000262887 TMEM106AQ96A25 262 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 CCDC74AQ96AQ1 378 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 RASD2Q96D21 266 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 MYADMQ96S97 322 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 SEC11CQ9BY50 192 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 DUSP22Q9NRW4 184 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 C19orf53Q9UNZ5 99 aaPredicted RBP13.62□□□□□ -0.23
XRCC1-201ENST00000262887 KCNK6Q9Y257 313 aa13.62□□□□□ -0.23
XRCC1-201ENST00000262887 SCN3AQ9NY46 2000 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 TMEM72A0PK05 275 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 CXCL14O95715 111 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 ABOP16442 354 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 TAS2R19P59542 299 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 RAB5BP61020 215 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 SNRPNP63162 240 aaKnown RBP13.61□□□□□ -0.23
XRCC1-201ENST00000262887 DHRS2Q13268 280 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 PLEKHN1Q494U1 663 aaPredicted RBP13.61□□□□□ -0.23
XRCC1-201ENST00000262887 FAM109BQ6ICB4 259 aaPredicted RBP13.61□□□□□ -0.23
XRCC1-201ENST00000262887 CDRT4Q8N9R6 151 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 GAL3ST3Q96A11 431 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 NUDT19A8MXV4 375 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 SRPX2O60687 465 aaPredicted RBP13.61□□□□□ -0.23
XRCC1-201ENST00000262887 GLCEO94923 617 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 RNF224P0DH78 156 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 CPMP14384 443 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 NFYBP25208 207 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 CMPK1P30085 196 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 POU3F4P49335 361 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 BEND4Q6ZU67 534 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 ZAR1Q86SH2 424 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF511Q8NB15 262 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF417Q8TAU3 575 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 ALG12Q9BV10 488 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 UCK1Q9HA47 277 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 MYOZ1Q9NP98 299 aaPredicted RBP13.61□□□□□ -0.23
XRCC1-201ENST00000262887 OR1A2Q9Y585 309 aa13.61□□□□□ -0.23
XRCC1-201ENST00000262887 A0A1B0GTH9 108 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 BRINP1O60477 761 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 RDH16O75452 317 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 UPK3AO75631 287 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 FBP1P09467 338 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 CD79AP11912 226 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 PEBP1P30086 187 aaKnown RBP13.6□□□□□ -0.23
XRCC1-201ENST00000262887 GABRA3P34903 492 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF77Q15935 545 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 ODF4Q2M2E3 257 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 ATPAF1Q5TC12 328 aaPredicted RBP13.6□□□□□ -0.23
XRCC1-201ENST00000262887 TMEM205Q6UW68 189 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 DPY19L2P2Q6ZN68 376 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 ANKRD33Q7Z3H0 272 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 BIVMQ86UB2 503 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 ZCCHC10Q8TBK6 192 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 GPX8Q8TED1 209 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 ADAD1Q96M93 576 aaKnown RBP13.6□□□□□ -0.23
XRCC1-201ENST00000262887 KCNK15Q9H427 330 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 TMEM231Q9H6L2 316 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 CAPN10Q9HC96 672 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 MKKSQ9NPJ1 570 aaPredicted RBP13.6□□□□□ -0.23
XRCC1-201ENST00000262887 ZNF346Q9UL40 294 aaKnown RBP13.6□□□□□ -0.23
XRCC1-201ENST00000262887 HCFC2Q9Y5Z7 792 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 M0QYG6 137 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 PRICKLE3O43900 615 aaPredicted RBP13.6□□□□□ -0.23
XRCC1-201ENST00000262887 AMY2AP04746 511 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 VASPP50552 380 aaPredicted RBP13.6□□□□□ -0.23
XRCC1-201ENST00000262887 ECH1Q13011 328 aa13.6□□□□□ -0.23
XRCC1-201ENST00000262887 ELAVL3Q14576 367 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms