RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 OLFM2O95897 454 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 RPS27AP62979 156 aaKnown RBP17.4■□□□□ 0.38
PTPRE-201ENST00000254667 UBA52P62987 128 aaKnown RBP17.4■□□□□ 0.38
PTPRE-201ENST00000254667 VHLLQ6RSH7 139 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 NT5CQ8TCD5 201 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 LIPHQ8WWY8 451 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 HSD17B8Q92506 261 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 FGGYQ96C11 551 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 ZPBPQ9BS86 351 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 FKRPQ9H9S5 495 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 LTB4R2Q9NPC1 389 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 COA3Q9Y2R0 106 aaPredicted RBP17.4■□□□□ 0.38
PTPRE-201ENST00000254667 YARS2Q9Y2Z4 477 aaKnown RBP17.4■□□□□ 0.38
PTPRE-201ENST00000254667 UGT2A1Q9Y4X1 527 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 OR51B4Q9Y5P0 310 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 TPOP07202 933 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 LUMP51884 338 aaPredicted RBP17.4■□□□□ 0.38
PTPRE-201ENST00000254667 F2RL1P55085 397 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 HSF1Q00613 529 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 SYT14P1Q58G82 188 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 AADACL3Q5VUY0 350 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 DOK3Q7L591 496 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 OR2A1Q8NGT9 310 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 FAM3DQ96BQ1 224 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 TSSK2Q96PF2 358 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 GNG12Q9UBI6 72 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 GPR55Q9Y2T6 319 aaPredicted RBP17.4■□□□□ 0.38
PTPRE-201ENST00000254667 ASB1Q9Y576 335 aa17.4■□□□□ 0.38
PTPRE-201ENST00000254667 SDK1Q7Z5N4 2213 aa17.39■□□□□ 0.38
PTPRE-201ENST00000254667 A8MXE2 369 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 IFNA17P01571 189 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 SBK2P0C263 348 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 FBXW12Q6X9E4 464 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 ZNF620Q6ZNG0 422 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 CCL4L1Q8NHW4 92 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 MOB1AQ9H8S9 216 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 CMC2Q9NRP2 79 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 ARAP2Q8WZ64 1704 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 hCG_1809904A0A1W2PP81 198 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 A0A1W2PPE2 198 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 A0A1W2PR64 198 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 A0A1W2PRV1 198 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 C4orf47A7E2U8 309 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 SULT1C2O00338 296 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 BET1O15155 118 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 LILRB5O75023 590 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 GALEQ14376 348 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 HYAL4Q2M3T9 481 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 GABARAPL3Q9BY60 117 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 KCNJ16Q9NPI9 418 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 SLC25A37Q9NYZ2 338 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 A0A0D9SG52 128 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 SPTY2D1-AS1A0A0U1RR47 76 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 SELENOFO60613 162 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 CHRM2P08172 466 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 SRMP19623 302 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 TMEM71Q6P5X7 295 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 RFPL4BQ6ZWI9 263 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 ANKRD10Q9NXR5 420 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 POMT2Q9UKY4 750 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 MED16Q9Y2X0 877 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 LINC01565O15544 149 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 MSL3P1P0C860 447 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 CAMK2BQ13554 666 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 ZNF529Q6P280 563 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 GPR155Q7Z3F1 870 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 OSGIN1Q9UJX0 560 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 PRELID1Q9Y255 219 aa17.39■□□□□ 0.37
PTPRE-201ENST00000254667 A0A1W2PPV4 95 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 A0A1W2PS29 197 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 ARRDC5A6NEK1 342 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 SGCEO43556 437 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 NXPH2O95156 264 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 F10P00742 488 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 POU3F3P20264 500 aaPredicted RBP17.38■□□□□ 0.37
PTPRE-201ENST00000254667 PNLIPRP2P54317 469 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 OVCH1Q7RTY7 1134 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.38■□□□□ 0.37
PTPRE-201ENST00000254667 UBL7Q96S82 380 aaPredicted RBP17.38■□□□□ 0.37
PTPRE-201ENST00000254667 ZNF436Q9C0F3 470 aaPredicted RBP17.38■□□□□ 0.37
PTPRE-201ENST00000254667 SELEP16581 610 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 SDHAP31040 664 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 ZNF136P52737 540 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 SLC9A3R2Q15599 337 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 ZNF628Q5EBL2 1059 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 ZNF546Q86UE3 836 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 POC1BQ8TC44 478 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 GAB3Q8WWW8 586 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 NKX6-3A6NJ46 265 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 LMO7DNF2Z398 122 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 CD79BP40259 229 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 VWA2Q5GFL6 755 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 LINC00299Q6ZSB3 139 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 NAXDQ8IW45 347 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 EVI2BP34910 448 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 MRPL19P49406 292 aaKnown RBP17.38■□□□□ 0.37
PTPRE-201ENST00000254667 ISL1P61371 349 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 GLYR1Q49A26 553 aaPredicted RBP17.38■□□□□ 0.37
PTPRE-201ENST00000254667 LILRA6Q6PI73 481 aa17.38■□□□□ 0.37
PTPRE-201ENST00000254667 NPAP1Q9NZP6 1156 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms