RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 MYBPC1Q00872 1141 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 TNK1Q13470 666 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 CLEC12BQ2HXU8 276 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 GSG1Q2KHT4 349 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 MST1LQ2TV78 715 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 ALG10Q5BKT4 473 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 PIWIL3Q7Z3Z3 882 aaKnown RBP19.91■□□□□ 0.78
LSM4-201ENST00000252816 BIVMQ86UB2 503 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 LRRC75AQ8NAA5 344 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 NOXO1Q8NFA2 376 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 OR13C2Q8NGS9 318 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 OR51A7Q8NH64 312 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 FGFBP3Q8TAT2 258 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 SLC7A13Q8TCU3 470 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 MS4A3Q96HJ5 214 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 TNFRSF13CQ96RJ3 184 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 ANKRD19PQ9H560 264 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 MAGEL2Q9UJ55 1249 aa19.91■□□□□ 0.78
LSM4-201ENST00000252816 NPIPB13A6NJU9 1138 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 EFCAB9A8MZ26 197 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 NPIPB4C9JG80 1138 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 hCG_2039718K7EN88 272 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 CDC42EP2O14613 210 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 SMAD7O15105 426 aaKnown RBP19.9■□□□□ 0.78
LSM4-201ENST00000252816 DIRAS1O95057 198 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 PATE4P0C8F1 98 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 RHCEP18577 417 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 GPR4P46093 362 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 ETFDHQ16134 617 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 IQCCQ4KMZ1 466 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 GKAP1Q5VSY0 366 aaPredicted RBP19.9■□□□□ 0.78
LSM4-201ENST00000252816 PODNL1Q6PEZ8 512 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 C16orf89Q6UX73 402 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 IGFN1Q86VF2 1251 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 SLC22A24Q8N4F4 322 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 HDAC2Q92769 488 aaKnown RBP19.9■□□□□ 0.78
LSM4-201ENST00000252816 TXNIPQ9H3M7 391 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 FAM53CQ9NYF3 392 aa19.9■□□□□ 0.78
LSM4-201ENST00000252816 NIPBLQ6KC79 2804 aaeCLIP19.9■□□□□ 0.78
LSM4-201ENST00000252816 A0A1W2PRQ8 180 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 CENPBD1B2RD01 187 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 ARPC2O15144 300 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 SEMG1P04279 462 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 H1F0P07305 194 aaKnown RBP19.89■□□□□ 0.77
LSM4-201ENST00000252816 ZNF14P17017 642 aaPredicted RBP19.89■□□□□ 0.77
LSM4-201ENST00000252816 GIPRP48546 466 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 PTDSS1P48651 473 aaKnown RBP19.89■□□□□ 0.77
LSM4-201ENST00000252816 ZNF133P52736 654 aaPredicted RBP19.89■□□□□ 0.77
LSM4-201ENST00000252816 MXRA7P84157 204 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 TOP3AQ13472 1001 aaPredicted RBP19.89■□□□□ 0.77
LSM4-201ENST00000252816 DGCR6Q14129 220 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 SWI5Q1ZZU3 235 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 VHLLQ6RSH7 139 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 DNM1P46Q6ZS02 220 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 HDDC2Q7Z4H3 204 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 OAFQ86UD1 273 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 OR4F15Q8NGB8 312 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 NANOS1Q8WY41 292 aaKnown RBP19.89■□□□□ 0.77
LSM4-201ENST00000252816 NMD3Q96D46 503 aaKnown RBP19.89■□□□□ 0.77
LSM4-201ENST00000252816 FBXO17Q96EF6 278 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 PYURFQ96I23 114 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 SH3GL3Q99963 347 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 NDE1Q9NXR1 346 aa19.89■□□□□ 0.77
LSM4-201ENST00000252816 FAM32AQ9Y421 112 aaKnown RBP19.89■□□□□ 0.77
LSM4-201ENST00000252816 IGKV1D-43A0A0B4J1Z2 117 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 IGHMP01871 453 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 OR8G3PP0DMU2 310 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 RIPPLY3P57055 190 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 CTXN1P60606 82 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 RAB1AP62820 205 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 ADIPOQQ15848 244 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 TMPRSS11FQ6ZWK6 438 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 CCDC197Q8NCU1 140 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 NUP37Q8NFH4 326 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 IL17RDQ8NFM7 739 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 OR4K5Q8NGD3 323 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 DHRS1Q96LJ7 313 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 NSMCE2Q96MF7 247 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 KCNK17Q96T54 332 aa19.88■□□□□ 0.77
LSM4-201ENST00000252816 BARX1Q9HBU1 254 aaPredicted RBP19.88■□□□□ 0.77
LSM4-201ENST00000252816 STX18Q9P2W9 335 aaKnown RBP19.88■□□□□ 0.77
LSM4-201ENST00000252816 ZNF346Q9UL40 294 aaKnown RBP19.88■□□□□ 0.77
LSM4-201ENST00000252816 CSPG4Q6UVK1 2322 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 ARFGEF3Q5TH69 2177 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 TRBV4-1A0A0J9YWV2 114 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 B2RBV5 119 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 H7C417 338 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 UBL3O95164 117 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 SLC2A10O95528 541 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 ZNF26P17031 533 aaPredicted RBP19.87■□□□□ 0.77
LSM4-201ENST00000252816 SERPINF1P36955 418 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 SLC9A3P48764 834 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 RPL27P61353 136 aaKnown RBP19.87■□□□□ 0.77
LSM4-201ENST00000252816 CHRNB3Q05901 458 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 FMODQ06828 376 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 SEC23BQ15437 767 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 TAF11Q15544 211 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 FGD3Q5JSP0 725 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 C10orf128Q5T292 105 aa19.87■□□□□ 0.77
LSM4-201ENST00000252816 Q71RC1 249 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms