RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MAS1P04201 325 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 HEXBP07686 556 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 SLC6A8P48029 635 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 AP2S1P53680 142 aaPredicted RBP14.24□□□□□ -0.13
LRFN1-201ENST00000248668 KCTD20Q7Z5Y7 419 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 NSMAFQ92636 917 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 UBL7Q96S82 380 aaPredicted RBP14.24□□□□□ -0.13
LRFN1-201ENST00000248668 NUDT15Q9NV35 164 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 MED11Q9P086 117 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 SHOXO15266 292 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 CCL7P80098 99 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 CBFBQ13951 182 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 NTRK2Q16620 822 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 FCRLAQ7L513 359 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 ADGRG3Q86Y34 549 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 GALNT11Q8NCW6 608 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 ZNF417Q8TAU3 575 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 ZNF587Q96SQ5 575 aaPredicted RBP14.24□□□□□ -0.13
LRFN1-201ENST00000248668 PTDSS2Q9BVG9 487 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 TAS2R10Q9NYW0 307 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 NPFFR2Q9Y5X5 522 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 RTTNQ86VV8 2226 aa14.24□□□□□ -0.13
LRFN1-201ENST00000248668 TRAV36DV7A0A075B6V5 113 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 TRAV1-2A0A0B4J238 106 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 A0A1W2PQM1 296 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 SLC43A1O75387 559 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 OR6A2O95222 327 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 PDGFAP04085 211 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 CCR6P51684 374 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 DCAF7P61962 342 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 KIF26BQ2KJY2 2108 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 LINGO2Q7L985 606 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 MDGA2Q7Z553 956 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 CMTM4Q8IZR5 234 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 ZNF676Q8N7Q3 588 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 OR5AK2Q8NH90 309 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 ANKRD10Q9NXR5 420 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 SLCO1C1Q9NYB5 712 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 UPK3AO75631 287 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 MT-ND4P03905 459 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 FCER2P06734 321 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 SPARCP09486 303 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 FBXO45P0C2W1 286 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 ARSBP15848 533 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 CLDN20P56880 219 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 RIN1Q13671 783 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 NKAIN1Q4KMZ8 207 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 CLVS2Q5SYC1 327 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 SIAH3Q8IW03 269 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 OR8H3Q8N146 312 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 TOMM5Q8N4H5 51 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 MRPL48Q96GC5 212 aaKnown RBP14.23□□□□□ -0.13
LRFN1-201ENST00000248668 ARL5BQ96KC2 179 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 INTS14Q96SY0 518 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 H0YC42 278 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 H3BML4 177 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 SCRG1O75711 98 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 MPZL1O95297 269 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 PDGFBP01127 241 aaPredicted RBP14.23□□□□□ -0.13
LRFN1-201ENST00000248668 SLC25A1P53007 311 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 IL10RAQ13651 578 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 C1orf140Q5VVS0 124 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 PYHIN1Q6K0P9 492 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 ARSKQ6UWY0 536 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 MAMDC2Q7Z304 686 aaPredicted RBP14.23□□□□□ -0.13
LRFN1-201ENST00000248668 DUSP18Q8NEJ0 188 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 ZNF768Q9H5H4 540 aaKnown RBP14.23□□□□□ -0.13
LRFN1-201ENST00000248668 LIN7BQ9HAP6 207 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 NKIRAS2Q9NYR9 191 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 SUSD2Q9UGT4 822 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 HRH3Q9Y5N1 445 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 CACNG2Q9Y698 323 aa14.23□□□□□ -0.13
LRFN1-201ENST00000248668 SIGLEC6O43699 453 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 ORC5O43913 435 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 P2RX1P51575 399 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 PNLIPRP2P54317 469 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 ALKBH1Q13686 389 aaKnown RBP14.22□□□□□ -0.13
LRFN1-201ENST00000248668 ISXQ2M1V0 245 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 ZNF684Q5T5D7 378 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 LCN10Q6JVE6 187 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 TMEM185BQ9H7F4 350 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 TCF7L1Q9HCS4 588 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 TRBV11-1A0A0K0K1C0 115 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 ZNF593O00488 134 aaPredicted RBP14.22□□□□□ -0.13
LRFN1-201ENST00000248668 GATBO75879 557 aaKnown RBP14.22□□□□□ -0.13
LRFN1-201ENST00000248668 CFIP05156 583 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 SYPP08247 313 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 GIFP27352 417 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 LYSMD4Q5XG99 296 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 WDR74Q6RFH5 385 aaPredicted RBP14.22□□□□□ -0.13
LRFN1-201ENST00000248668 PRSS42Q7Z5A4 293 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 CDC20BQ86Y33 519 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 TEX19Q8NA77 164 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 APCDD1LQ8NCL9 501 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 LIPHQ8WWY8 451 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 TTC9Q92623 222 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 YIPF5Q969M3 257 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 FADS1O60427 444 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 WNT11O96014 354 aa14.22□□□□□ -0.13
LRFN1-201ENST00000248668 CTLA4P16410 223 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms