RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TIGARQ9NQ88 270 aa12.69□□□□□ -0.38
SDF2-201ENST00000247020 LOC100506127A0A0U1RQW1 187 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 TRDV1A0A1B0GX56 115 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 ACOT7O00154 380 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 PLPP2O43688 288 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 TLX3O43711 291 aaPredicted RBP12.68□□□□□ -0.38
SDF2-201ENST00000247020 SLC16A7O60669 478 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 KHDRBS3O75525 346 aaKnown RBP12.68□□□□□ -0.38
SDF2-201ENST00000247020 GPX5O75715 221 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 LALBAP00709 142 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 OPN1LWP04000 364 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 HRGP04196 525 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 HLA-DPB1P04440 258 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 CTLA4P16410 223 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 POU3F2P20265 443 aaPredicted RBP12.68□□□□□ -0.38
SDF2-201ENST00000247020 PTGS2P35354 604 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 MEOX1P50221 254 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 GBX2P52951 348 aaPredicted RBP12.68□□□□□ -0.38
SDF2-201ENST00000247020 PLGLB1Q02325 96 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 EGR3Q06889 387 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 SRSF6Q13247 344 aaKnown RBP12.68□□□□□ -0.38
SDF2-201ENST00000247020 ZNF766Q5HY98 468 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 WIPI1Q5MNZ9 446 aaPredicted RBP12.68□□□□□ -0.38
SDF2-201ENST00000247020 GALNTL5Q7Z4T8 443 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 SLC22A16Q86VW1 577 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 ZNF511Q8NB15 262 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 NOXO1Q8NFA2 376 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 OR2V1Q8NHB1 315 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 NDNFQ8TB73 568 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 ACKR4Q9NPB9 350 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 MED29Q9NX70 200 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 CCDC59Q9P031 241 aaKnown RBP12.68□□□□□ -0.38
SDF2-201ENST00000247020 ZMIZ1Q9ULJ6 1067 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 A3GALT2U3KPV4 340 aa12.68□□□□□ -0.38
SDF2-201ENST00000247020 DMXL1Q9Y485 3027 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 CUL9Q8IWT3 2517 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 A6NL46 340 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 J3QLW9 94 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 TNFSF11O14788 317 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 SULT1C4O75897 302 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 CLPXO76031 633 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 TACSTD2P09758 323 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 PGA4P0DJD7 388 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 PGA3P0DJD8 388 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 ZNF19P17023 458 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 CELP19835 753 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 PAX7P23759 505 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 TGM4P49221 684 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 TNFSF10P50591 281 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 OR12D2P58182 307 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 RUNX1T1Q06455 604 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 BCL2A1Q16548 175 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 TEX30Q5JUR7 227 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 ZNF684Q5T5D7 378 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 HBMQ6B0K9 141 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 SSX6Q7RTT6 188 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 GPAT4Q86UL3 456 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 ZNF454Q8N9F8 522 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 OTOSQ8NHW6 89 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 ASB17Q8WXJ9 295 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 CPNE4Q96A23 557 aaPredicted RBP12.67□□□□□ -0.38
SDF2-201ENST00000247020 TXNDC15Q96J42 360 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 CENPOQ9BU64 300 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 HES7Q9BYE0 225 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.67□□□□□ -0.384e-6■□□□□ 8.7
SDF2-201ENST00000247020 PAQR5Q9NXK6 330 aaPredicted RBP12.67□□□□□ -0.38
SDF2-201ENST00000247020 KLHL9Q9P2J3 617 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 LAMP5Q9UJQ1 280 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 COPS3Q9UNS2 423 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 GSTK1Q9Y2Q3 226 aa12.67□□□□□ -0.38
SDF2-201ENST00000247020 SLC35F4A4IF30 521 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 ZNF726A6NNF4 738 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 FAM171A2A8MVW0 826 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 ZNF814B7Z6K7 855 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 EIF1AYO14602 144 aaKnown RBP12.66□□□□□ -0.38
SDF2-201ENST00000247020 OGG1O15527 345 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 ALOX5APP20292 161 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 ENPP1P22413 925 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 CD97P48960 835 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 ENTPD1P49961 510 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 CCL11P51671 97 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 CARD18P57730 90 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 CLRN1P58418 232 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 RPS3AP61247 264 aaKnown RBP12.66□□□□□ -0.38
SDF2-201ENST00000247020 DBPQ10586 325 aaPredicted RBP12.66□□□□□ -0.38
SDF2-201ENST00000247020 HIST3H3Q16695 136 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 DMKNQ6E0U4 476 aaPredicted RBP12.66□□□□□ -0.38
SDF2-201ENST00000247020 RPL22L1Q6P5R6 122 aaKnown RBP12.66□□□□□ -0.38
SDF2-201ENST00000247020 FAM220AQ7Z4H9 259 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 FAM109AQ8N4B1 249 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 TMEM251Q8N6I4 163 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 FDCSPQ8NFU4 85 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 OR6N2Q8NGY6 317 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 RPS4Y2Q8TD47 263 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 RELTQ969Z4 430 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 EXOSC4Q9NPD3 245 aaKnown RBP12.66□□□□□ -0.38
SDF2-201ENST00000247020 TXNL4BQ9NX01 149 aaKnown RBP12.66□□□□□ -0.38
SDF2-201ENST00000247020 KLK13Q9UKR3 277 aa12.66□□□□□ -0.38
SDF2-201ENST00000247020 NPIPA2E9PIF3 369 aa12.65□□□□□ -0.38
SDF2-201ENST00000247020 NPIPA3F8WFD2 350 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms