RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 KATNB1Q9BVA0 655 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 TMEM27Q9HBJ8 222 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 IL1RAPQ9NPH3 570 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 SELENONQ9NZV5 590 aa11.93□□□□□ -0.5
DDX39A-201ENST00000242776 FKBP6O75344 327 aa11.92□□□□□ -0.5
DDX39A-201ENST00000242776 H3F3AP84243 136 aa11.92□□□□□ -0.5
DDX39A-201ENST00000242776 HGFACQ04756 655 aa11.92□□□□□ -0.5
DDX39A-201ENST00000242776 OR7A5Q15622 319 aa11.92□□□□□ -0.5
DDX39A-201ENST00000242776 EFNB3Q15768 340 aa11.92□□□□□ -0.5
DDX39A-201ENST00000242776 PEG10Q86TG7 708 aaKnown RBP11.92□□□□□ -0.5
DDX39A-201ENST00000242776 ZNF786Q8N393 782 aa11.92□□□□□ -0.5
DDX39A-201ENST00000242776 OR9K2Q8NGE7 335 aa11.92□□□□□ -0.5
DDX39A-201ENST00000242776 ZNF418Q8TF45 676 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-201ENST00000242776 NEU4Q8WWR8 484 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-201ENST00000242776 DDIT4LQ96D03 193 aa11.92□□□□□ -0.5
DDX39A-201ENST00000242776 DUS3LQ96G46 650 aaKnown RBP11.92□□□□□ -0.5
DDX39A-201ENST00000242776 ZNF347Q96SE7 839 aa11.92□□□□□ -0.5
DDX39A-201ENST00000242776 RSPO3Q9BXY4 272 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-201ENST00000242776 HIF1ANQ9NWT6 349 aa11.92□□□□□ -0.5
DDX39A-201ENST00000242776 ENPP4Q9Y6X5 453 aa11.92□□□□□ -0.5
DDX39A-201ENST00000242776 OR6C65A6NJZ3 312 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 FAM157AC9JC47 383 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 DNPH1O43598 174 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 EIF1BO60739 113 aaKnown RBP11.91□□□□□ -0.5
DDX39A-201ENST00000242776 FCGR1AP12314 374 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 RHCEP18577 417 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 NPR2P20594 1047 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 TACR3P29371 465 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 ACAA2P42765 397 aaKnown RBP11.91□□□□□ -0.5
DDX39A-201ENST00000242776 MAGEA2P43356 314 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 HTR3AP46098 478 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 SELENOPP49908 381 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 TAS2R41P59536 307 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 NPRL3Q12980 569 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 WBP2NLQ6ICG8 309 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 LINGO2Q7L985 606 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 LSMEM1Q8N8F7 131 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 ZIC4Q8N9L1 334 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 OR4D11Q8NGI4 311 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 PRRC1Q96M27 445 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 DOK1Q99704 481 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 OSGIN1Q9UJX0 560 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 PCDHB10Q9UN67 800 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 TRAPPC4Q9Y296 219 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 AP4S1Q9Y587 144 aa11.91□□□□□ -0.5
DDX39A-201ENST00000242776 A0A0A6YYJ9 748 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 CPSF4LA6NMK7 179 aaKnown RBP11.9□□□□□ -0.5
DDX39A-201ENST00000242776 B4DSR2 109 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 ZNF587BE7ETH6 402 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 WNT9BO14905 357 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 OR5F1O95221 314 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 PRG2P13727 222 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 PCMT1P22061 227 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 POLR2HP52434 150 aaKnown RBP11.9□□□□□ -0.5
DDX39A-201ENST00000242776 RIN1Q13671 783 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 OR1Q1Q15612 314 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 NPTX1Q15818 432 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 ENTPD8Q5MY95 495 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 KRT80Q6KB66 452 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 FAHD2BQ6P2I3 314 aaPredicted RBP11.9□□□□□ -0.5
DDX39A-201ENST00000242776 NIPAL3Q6P499 406 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 ZNF613Q6PF04 617 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 PIWIL3Q7Z3Z3 882 aaKnown RBP11.9□□□□□ -0.5
DDX39A-201ENST00000242776 ABHD12BQ7Z5M8 362 aaPredicted RBP11.9□□□□□ -0.5
DDX39A-201ENST00000242776 RBM45Q8IUH3 476 aaKnown RBP11.9□□□□□ -0.5
DDX39A-201ENST00000242776 CADM2Q8N3J6 435 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 POMGNT2Q8NAT1 580 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 PAPD5Q8NDF8 572 aaKnown RBP11.9□□□□□ -0.5
DDX39A-201ENST00000242776 CLDND2Q8NHS1 167 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 DNAJA4Q8WW22 397 aaPredicted RBP11.9□□□□□ -0.5
DDX39A-201ENST00000242776 BCL2L2Q92843 193 aaPredicted RBP11.9□□□□□ -0.5
DDX39A-201ENST00000242776 TMEM186Q96B77 213 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 FAHD2AQ96GK7 314 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 C7orf34Q96L11 122 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 CHID1Q9BWS9 393 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 ARMC1Q9NVT9 282 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 TREM2Q9NZC2 230 aa11.9□□□□□ -0.5
DDX39A-201ENST00000242776 TGP01266 2768 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 TMEM129A0AVI4 362 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 TMEM89A2RUT3 159 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 TRAPPC13A5PLN9 417 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 TRIM77I1YAP6 450 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 ENTPD5O75356 428 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 UPK3AO75631 287 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 IGFBP1P08833 259 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-201ENST00000242776 THRBP10828 461 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 HTR2AP28223 471 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 CLK1P49759 484 aaKnown RBP11.89□□□□□ -0.51
DDX39A-201ENST00000242776 SMIM11AP58511 58 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 ELF3P78545 371 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-201ENST00000242776 HOXC5Q00444 222 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 ST3GAL3Q11203 375 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 SWT1Q5T5J6 900 aaKnown RBP11.89□□□□□ -0.51
DDX39A-201ENST00000242776 TMEM225Q6GV28 225 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 PAQR6Q6TCH4 344 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 OR4F15Q8NGB8 312 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 ADAMTS16Q8TE57 1224 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 ZFAND2BQ8WV99 257 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 PYDC1Q8WXC3 89 aa11.89□□□□□ -0.51
DDX39A-201ENST00000242776 TMEM45BQ96B21 275 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms