RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 RASD1Q9Y272 281 aa13.59□□□□□ -0.23
HDHD3-201ENST00000238379 CELSR3Q9NYQ7 3312 aa13.59□□□□□ -0.23
HDHD3-201ENST00000238379 ZNF670-ZNF695F2Z2N8 137 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 EFSO43281 561 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 DNPH1O43598 174 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 GLSO94925 669 aaPredicted RBP13.58□□□□□ -0.24
HDHD3-201ENST00000238379 CD46P15529 392 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 CAPZA2P47755 286 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 CD97P48960 835 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 STARP49675 285 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 BLVRAP53004 296 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 ACTA2P62736 377 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 ACTG2P63267 376 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 ARG2P78540 354 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 FMODQ06828 376 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 GPR50Q13585 617 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 HYAL4Q2M3T9 481 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 TP53I3Q53FA7 332 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 ZNF684Q5T5D7 378 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 CD200R1LQ6Q8B3 271 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 USP43Q70EL4 1123 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 CDC20BQ86Y33 519 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 SCMH1Q96GD3 660 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 ADGRG7Q96K78 797 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 INTS14Q96SY0 518 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 TM9SF2Q99805 663 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 SRXN1Q9BYN0 137 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 CCDC86Q9H6F5 360 aaKnown RBP13.58□□□□□ -0.24
HDHD3-201ENST00000238379 EXOSC4Q9NPD3 245 aaKnown RBP13.58□□□□□ -0.24
HDHD3-201ENST00000238379 SSR3Q9UNL2 185 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 KLHDC2Q9Y2U9 406 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 SPTBN2O15020 2390 aa13.58□□□□□ -0.24
HDHD3-201ENST00000238379 PRR32B1ATL7 298 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 KLRC4-KLRK1H3BQV0 150 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 LINC01387J3KSC0 135 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 EIF1AYO14602 144 aaKnown RBP13.57□□□□□ -0.24
HDHD3-201ENST00000238379 VAMP5O95183 116 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 CELA3AP09093 270 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 ZNF43P17038 809 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 MEOX1P50221 254 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 SUCLG1P53597 346 aaKnown RBP13.57□□□□□ -0.24
HDHD3-201ENST00000238379 CLDN15P56746 228 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 RAC3P60763 192 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 TUBA1BP68363 451 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 ESPNLQ6ZVH7 1005 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 ASB18Q6ZVZ8 466 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 TUBA1AQ71U36 451 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 TMEM251Q8N6I4 163 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 ZFP62Q8NB50 900 aaPredicted RBP13.57□□□□□ -0.24
HDHD3-201ENST00000238379 KBTBD8Q8NFY9 601 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 OR6N2Q8NGY6 317 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 OR6X1Q8NH79 312 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 SNX33Q8WV41 574 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 FOXN4Q96NZ1 517 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 UCN2Q96RP3 112 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 NAA11Q9BSU3 229 aaPredicted RBP13.57□□□□□ -0.24
HDHD3-201ENST00000238379 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.57□□□□□ -0.24
HDHD3-201ENST00000238379 MRPL22Q9NWU5 206 aaKnown RBP13.57□□□□□ -0.24
HDHD3-201ENST00000238379 COA3Q9Y2R0 106 aaPredicted RBP13.57□□□□□ -0.24
HDHD3-201ENST00000238379 IGHV3-15A0A0B4J1V0 119 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 IGKV1D-43A0A0B4J1Z2 117 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 SLC35F4A4IF30 521 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 FAM166BA8MTA8 275 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 PGA4P0DJD7 388 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 PGA3P0DJD8 388 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 POU3F2P20265 443 aaPredicted RBP13.57□□□□□ -0.24
HDHD3-201ENST00000238379 ALOX5APP20292 161 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 ENPP1P22413 925 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 PTGS2P35354 604 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 MAGEA5P43359 124 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 TAS2R43P59537 309 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 GLO1Q04760 184 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 FOXC1Q12948 553 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 POU4F3Q15319 338 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 DEFB109BQ30KR1 87 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 DNM1P34Q6PK57 102 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 IGFL2Q6UWQ7 119 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 DPY19L4Q7Z388 723 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 TBC1D15Q8TC07 691 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 PELI1Q96FA3 418 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 SLC25A44Q96H78 314 aaPredicted RBP13.57□□□□□ -0.24
HDHD3-201ENST00000238379 ADAD1Q96M93 576 aaKnown RBP13.57□□□□□ -0.24
HDHD3-201ENST00000238379 MNTQ99583 582 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 TXNL4BQ9NX01 149 aaKnown RBP13.57□□□□□ -0.24
HDHD3-201ENST00000238379 PMF1-BGLAPU3KQ54 211 aa13.57□□□□□ -0.24
HDHD3-201ENST00000238379 CENPBD1B2RD01 187 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 SMAD9O15198 467 aaKnown RBP13.56□□□□□ -0.24
HDHD3-201ENST00000238379 PLPP2O43688 288 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 CLPXO76031 633 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 HLA-DQA2P01906 255 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 PSKH1P11801 424 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 SPINK2P20155 84 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 RPS27P42677 84 aaKnown RBP13.56□□□□□ -0.24
HDHD3-201ENST00000238379 TNFSF10P50591 281 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 CARD18P57730 90 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 FABP5Q01469 135 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 PLGLB1Q02325 96 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 SLC17A1Q14916 467 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 DGUOKQ16854 277 aa13.56□□□□□ -0.24
HDHD3-201ENST00000238379 ZNF766Q5HY98 468 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms