RNA–Protein interactions for RNA: ENST00000236273.8

SYF2-201, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYF2, Length 1,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-201ENST00000236273 TOP3AQ13472 1001 aaPredicted RBP19.44■□□□□ 0.7
SYF2-201ENST00000236273 ARIH2OSQ8N7S6 290 aa19.44■□□□□ 0.7
SYF2-201ENST00000236273 PAPD5Q8NDF8 572 aaKnown RBP19.44■□□□□ 0.7
SYF2-201ENST00000236273 OR9Q2Q8NGE9 314 aa19.44■□□□□ 0.7
SYF2-201ENST00000236273 ZNF75AQ96N20 296 aa19.44■□□□□ 0.7
SYF2-201ENST00000236273 MMADHCQ9H3L0 296 aaPredicted RBP19.44■□□□□ 0.7
SYF2-201ENST00000236273 CCM2LQ9NUG4 571 aaPredicted RBP19.44■□□□□ 0.7
SYF2-201ENST00000236273 IL20RAQ9UHF4 553 aa19.44■□□□□ 0.7
SYF2-201ENST00000236273 POFUT2Q9Y2G5 429 aa19.44■□□□□ 0.7
SYF2-201ENST00000236273 PLEKHA6Q9Y2H5 1048 aa19.44■□□□□ 0.7
SYF2-201ENST00000236273 RNF115Q9Y4L5 304 aa19.44■□□□□ 0.7
SYF2-201ENST00000236273 PLCE1Q9P212 2302 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 DSCAMO60469 2012 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 M0R1B8 84 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 NDUFB2O95178 105 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 WNT11O96014 354 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 GASTP01350 101 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 CD53P19397 219 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 PTAFRP25105 342 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 ERFP50548 548 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 IST1P53990 364 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 C10orf128Q5T292 105 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 SLC25A47Q6Q0C1 308 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 KLHL24Q6TFL4 600 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 ZNF813Q6ZN06 617 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 SPATA24Q86W54 205 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 KBTBD8Q8NFY9 601 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 IGFBPL1Q8WX77 278 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 UTP4Q969X6 686 aaKnown RBP19.43■□□□□ 0.7
SYF2-201ENST00000236273 Q96M85 177 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 NOX3Q9HBY0 568 aa19.43■□□□□ 0.7
SYF2-201ENST00000236273 IGHV1-18A0A0C4DH31 117 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 ABCD4O14678 606 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 SLC2A10O95528 541 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 IGKV3-15P01624 115 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 IGLV1-44P01699 117 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 B4GALT1P15291 398 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 HOXC12P31275 282 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 UBE2NP61088 152 aaKnown RBP19.42■□□□□ 0.7
SYF2-201ENST00000236273 FMODQ06828 376 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 TSPAN31Q12999 210 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 MESTQ5EB52 335 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 TMEM108Q6UXF1 575 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 HDDC2Q7Z4H3 204 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 TMEM179BQ7Z7N9 219 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 MYPOPQ86VE0 399 aaPredicted RBP19.42■□□□□ 0.7
SYF2-201ENST00000236273 FAM169BQ8N8A8 192 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 FGFBP3Q8TAT2 258 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 GNPDA2Q8TDQ7 276 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 AKAP1Q92667 903 aaKnown RBP eCLIP19.42■□□□□ 0.7
SYF2-201ENST00000236273 HTRA1Q92743 480 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 NINJ1Q92982 152 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 ALG12Q9BV10 488 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 SEC61A2Q9H9S3 476 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 UBTD1Q9HAC8 227 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 KRCC1Q9NPI7 259 aaPredicted RBP19.42■□□□□ 0.7
SYF2-201ENST00000236273 TMEM38BQ9NVV0 291 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 STX18Q9P2W9 335 aaKnown RBP19.42■□□□□ 0.7
SYF2-201ENST00000236273 UGT2A1Q9Y4X1 527 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 MAGED1Q9Y5V3 778 aaPredicted RBP19.42■□□□□ 0.7
SYF2-201ENST00000236273 U3KQV3 271 aa19.42■□□□□ 0.7
SYF2-201ENST00000236273 HS3ST1O14792 307 aa19.41■□□□□ 0.7
SYF2-201ENST00000236273 CBR1P16152 277 aa19.41■□□□□ 0.7
SYF2-201ENST00000236273 RPL4P36578 427 aaKnown RBP19.41■□□□□ 0.7
SYF2-201ENST00000236273 MICAQ29983 383 aa19.41■□□□□ 0.7
SYF2-201ENST00000236273 RFX4Q33E94 735 aa19.41■□□□□ 0.7
SYF2-201ENST00000236273 ZNF672Q499Z4 452 aaPredicted RBP19.41■□□□□ 0.7
SYF2-201ENST00000236273 SMARCD3Q6STE5 483 aa19.41■□□□□ 0.7
SYF2-201ENST00000236273 KLHL17Q6TDP4 642 aa19.41■□□□□ 0.7
SYF2-201ENST00000236273 SKA3Q8IX90 412 aa19.41■□□□□ 0.7
SYF2-201ENST00000236273 CCDC36Q8IYA8 594 aa19.41■□□□□ 0.7
SYF2-201ENST00000236273 SAMHD1Q9Y3Z3 626 aaKnown RBP19.41■□□□□ 0.7
SYF2-201ENST00000236273 IMPA2O14732 288 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 FKBP6O75344 327 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 CCNB2O95067 398 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 TXNDC12O95881 172 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 CST1P01037 141 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 HLA-HP01893 362 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 RAF1P04049 648 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 IFNGR2P38484 337 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 TESK1Q15569 626 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 C3orf36Q3SXR2 165 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 FAM205BPQ63HN1 556 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 DPY19L2P2Q6ZN68 376 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 MDP1Q86V88 176 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 SLC22A24Q8N4F4 322 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 LINC00471Q8N535 108 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 RASD2Q96D21 266 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 OR52D1Q9H346 318 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 REEP1Q9H902 201 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 SMURF2Q9HAU4 748 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 IER3IP1Q9Y5U9 82 aa19.4■□□□□ 0.7
SYF2-201ENST00000236273 A6NIZ1 184 aa19.39■□□□□ 0.69
SYF2-201ENST00000236273 ARHGEF9O43307 516 aa19.39■□□□□ 0.69
SYF2-201ENST00000236273 CELA3BP08861 270 aa19.39■□□□□ 0.69
SYF2-201ENST00000236273 PAX7P23759 505 aa19.39■□□□□ 0.69
SYF2-201ENST00000236273 RAP1BP61224 184 aa19.39■□□□□ 0.69
SYF2-201ENST00000236273 RAP1AP62834 184 aa19.39■□□□□ 0.69
SYF2-201ENST00000236273 THEM4Q5T1C6 240 aa19.39■□□□□ 0.69
SYF2-201ENST00000236273 B3GLCTQ6Y288 498 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms