RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 C17orf113A0A1B0GUU1 675 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 F5H5K5 113 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 MT-CO2P00403 227 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 CA3P07451 260 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 ZNF43P17038 809 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 HOXA9P31269 272 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 SLC6A12P48065 614 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 IHHQ14623 411 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 SLC22A24Q8N4F4 322 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 HCFC1R1Q9NWW0 138 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 FTSJ1Q9UET6 329 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 V9GYH0 126 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 MT-ND4LP03901 98 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 EPXP11678 715 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 CLDN2P57739 230 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 PLP2Q04941 152 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 LTB4RQ15722 352 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 FAM160A2Q8N612 972 aaPredicted RBP12.71□□□□□ -0.37
HCFC2-201ENST00000229330 DEFB119Q8N690 84 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 OR5M1Q8NGP8 315 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 CYB5R1Q9UHQ9 305 aa12.71□□□□□ -0.37
HCFC2-201ENST00000229330 DDX60LQ5H9U9 1706 aaKnown RBP12.71□□□□□ -0.37
HCFC2-201ENST00000229330 FITM1A5D6W6 292 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 UPK1AO00322 258 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 GPR75O95800 540 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 RPS18P62269 152 aaKnown RBP12.71□□□□□ -0.38
HCFC2-201ENST00000229330 ELOCQ15369 112 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 NKAIN3Q8N8D7 197 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 LMX1AQ8TE12 382 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 THAP3Q8WTV1 239 aaPredicted RBP12.71□□□□□ -0.38
HCFC2-201ENST00000229330 CMSS1Q9BQ75 279 aaKnown RBP12.71□□□□□ -0.38
HCFC2-201ENST00000229330 KLK11Q9UBX7 282 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 MRPS28Q9Y2Q9 187 aaKnown RBP12.71□□□□□ -0.38
HCFC2-201ENST00000229330 APBB3O95704 486 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 PMPCAQ10713 525 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 GSG1Q2KHT4 349 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 CCSMST1Q4G0I0 132 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 CPXM2Q8N436 756 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 AKR7LQ8NHP1 331 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 SMIM19Q96E16 107 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 C19orf25Q9UFG5 118 aaPredicted RBP12.71□□□□□ -0.38
HCFC2-201ENST00000229330 PLEKHM1Q9Y4G2 1056 aa12.71□□□□□ -0.38
HCFC2-201ENST00000229330 PRKRAO75569 313 aaKnown RBP12.7□□□□□ -0.38
HCFC2-201ENST00000229330 ARL3P36405 182 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 P2RX1P51575 399 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 REEP5Q00765 189 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 SERTAD2Q14140 314 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 ZNF628Q5EBL2 1059 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 EEF1A1P5Q5VTE0 462 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 MSRB3Q8IXL7 192 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 TEX19Q8NA77 164 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 KLHDC7BQ96G42 594 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 NAA11Q9BSU3 229 aaPredicted RBP12.7□□□□□ -0.38
HCFC2-201ENST00000229330 RHOFQ9HBH0 211 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 COL22A1Q8NFW1 1626 aaPredicted RBP12.7□□□□□ -0.38
HCFC2-201ENST00000229330 MBP02144 154 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 SDHAP31040 664 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 EPHA4P54764 986 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 F2RL1P55085 397 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 DLX2Q07687 328 aaPredicted RBP12.7□□□□□ -0.38
HCFC2-201ENST00000229330 OR7A5Q15622 319 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 ADIRFQ15847 76 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 SYS1Q8N2H4 156 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 OR5K2Q8NHB8 316 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 OR14L1PQ8NHC6 308 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 PRAMEF27A3QJZ7 478 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 TP53I11O14683 189 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 TGOLN2O43493 480 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 CD3DP04234 171 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 PRAMEF9Q5VWM5 478 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 CD300LGQ6UXG3 332 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 IL34Q6ZMJ4 242 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 PPP1R1CQ8WVI7 109 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 NKX2-4Q9H2Z4 354 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 OPA3Q9H6K4 179 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 ZNF286AQ9HBT8 521 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 TRAV1-2A0A0B4J238 106 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 ITGB7P26010 798 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 SNRPNP63162 240 aaKnown RBP12.7□□□□□ -0.38
HCFC2-201ENST00000229330 MALLQ13021 153 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 MEP1BQ16820 701 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 PARS2Q7L3T8 475 aaKnown RBP12.7□□□□□ -0.38
HCFC2-201ENST00000229330 TMPRSS5Q9H3S3 457 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 PDE7BQ9NP56 450 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 SLC2A4RGQ9NR83 387 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 ABI3Q9P2A4 366 aa12.7□□□□□ -0.38
HCFC2-201ENST00000229330 TCRBV21S2A2A0A5A6 115 aa12.69□□□□□ -0.38
HCFC2-201ENST00000229330 PLPP1O14494 284 aa12.69□□□□□ -0.38
HCFC2-201ENST00000229330 TRAPPC6AO75865 159 aa12.69□□□□□ -0.38
HCFC2-201ENST00000229330 RAC2P15153 192 aa12.69□□□□□ -0.38
HCFC2-201ENST00000229330 FBLP22087 321 aaKnown RBP12.69□□□□□ -0.38
HCFC2-201ENST00000229330 CTBSQ01459 385 aa12.69□□□□□ -0.38
HCFC2-201ENST00000229330 CDK5R1Q15078 307 aa12.69□□□□□ -0.38
HCFC2-201ENST00000229330 FAM27D1Q5T7N8 215 aa12.69□□□□□ -0.38
HCFC2-201ENST00000229330 GKN2Q86XP6 184 aa12.69□□□□□ -0.38
HCFC2-201ENST00000229330 OR2G3Q8NGZ4 309 aa12.69□□□□□ -0.38
HCFC2-201ENST00000229330 KCNIP1Q9NZI2 227 aa12.69□□□□□ -0.38
HCFC2-201ENST00000229330 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.69□□□□□ -0.38
HCFC2-201ENST00000229330 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.69□□□□□ -0.38
HCFC2-201ENST00000229330 A0A1W2PPV4 95 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms