RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 ZNF41P51814 821 aaPredicted RBP12.96□□□□□ -0.33
PRKAB1-201ENST00000229328 ALKBH1Q13686 389 aaKnown RBP12.96□□□□□ -0.33
PRKAB1-201ENST00000229328 THOC7Q6I9Y2 204 aaKnown RBP12.96□□□□□ -0.33
PRKAB1-201ENST00000229328 KCTD20Q7Z5Y7 419 aa12.96□□□□□ -0.33
PRKAB1-201ENST00000229328 LRRC28Q86X40 367 aaPredicted RBP12.96□□□□□ -0.33
PRKAB1-201ENST00000229328 OTOSQ8NHW6 89 aa12.96□□□□□ -0.33
PRKAB1-201ENST00000229328 UBL7Q96S82 380 aaPredicted RBP12.96□□□□□ -0.33
PRKAB1-201ENST00000229328 TMEM185BQ9H7F4 350 aa12.96□□□□□ -0.33
PRKAB1-201ENST00000229328 CLEC4AQ9UMR7 237 aa12.96□□□□□ -0.33
PRKAB1-201ENST00000229328 CHCHD2Q9Y6H1 151 aaPredicted RBP12.96□□□□□ -0.33
PRKAB1-201ENST00000229328 IGLV3-32A0A0A0MS00 114 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 NOTOA8MTQ0 251 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 MPZL1O95297 269 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 IFNGR1P15260 489 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 SRMP19623 302 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 ACP1P24666 158 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 CLDN6P56747 220 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 RIN1Q13671 783 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 CCDC157Q569K6 752 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 H1FNTQ75WM6 255 aaPredicted RBP12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 WDSUB1Q8N9V3 476 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 OR2M3Q8NG83 312 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 DDIT4LQ96D03 193 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 TXNDC15Q96J42 360 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 ZNF700Q9H0M5 742 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 ZCCHC4Q9H5U6 513 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 MED29Q9NX70 200 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 ANKRD10Q9NXR5 420 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 RALGAPA1Q6GYQ0 2036 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 ANKRD61A6NGH8 418 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 LIPT2A6NK58 231 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 C9J4A7 227 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 H3BSH0 61 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 ZNF208O43345 1280 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 HLA-DQB1P01920 261 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 MSX1P28360 303 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 FMODQ06828 376 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 BCL2A1Q16548 175 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 YIF1BQ5BJH7 314 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 LRRN1Q6UXK5 716 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 PRSS35Q8N3Z0 413 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 OR6S1Q8NH40 331 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 DERL3Q96Q80 235 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 SNX18Q96RF0 628 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 COA3Q9Y2R0 106 aaPredicted RBP12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 CACNA1CQ13936 2221 aa12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 COL27A1Q8IZC6 1860 aaPredicted RBP12.95□□□□□ -0.34
PRKAB1-201ENST00000229328 WNT11O96014 354 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 NPR2P20594 1047 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 PTBP1P26599 531 aaKnown RBP eCLIP12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 TLE3Q04726 772 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 EGR3Q06889 387 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 ZP4Q12836 540 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 SELENBP1Q13228 472 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 ODF4Q2M2E3 257 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 SLC25A53Q5H9E4 307 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 TRIQKQ629K1 86 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 DBX2Q6ZNG2 339 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 TRILQ7L0X0 811 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 RDH10Q8IZV5 341 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 OR2Y1Q8NGV0 311 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 OR2G2Q8NGZ5 317 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 OR10AC1Q8NH08 325 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 OR5AK2Q8NH90 309 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 ASB10Q8WXI3 467 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 MRGPRX4Q96LA9 322 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 SLC22A4Q9H015 551 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 CHST11Q9NPF2 352 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 SDHAF3Q9NRP4 125 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 TFECO14948 347 aaPredicted RBP12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 LANCL1O43813 399 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 GP1BAP07359 652 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 SPARCP09486 303 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 SOX2P48431 317 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 TPTEP56180 551 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 POU3F1Q03052 451 aaPredicted RBP12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 MYBPHQ13203 477 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 ZNF248Q8NDW4 579 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 OR11G2Q8NGC1 345 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 NSMAFQ92636 917 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 MNTQ99583 582 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 TMEM14AQ9Y6G1 99 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 EML6Q6ZMW3 1958 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 MED12Q93074 2177 aa12.94□□□□□ -0.34
PRKAB1-201ENST00000229328 IGKV1D-43A0A0B4J1Z2 117 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 LNP1A1A4G5 178 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 OR4C45A6NMZ5 311 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 FZD7O75084 574 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 KIR2DL3P43628 341 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 OR2B6P58173 313 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 RPS18P62269 152 aaKnown RBP12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 ADAM8P78325 824 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 MDGA2Q7Z553 956 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 GLCCI1Q86VQ1 547 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 SCAIQ8N9R8 606 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 C19orf18Q8NEA5 215 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 OR51A4Q8NGJ6 313 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 BRD7Q9NPI1 651 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 A0A1W2PNR3 127 aa12.93□□□□□ -0.34
PRKAB1-201ENST00000229328 NPIPA5E9PKD4 350 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms