RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 MFSD4AQ8N468 514 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 OR13F1Q8NGS4 319 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 OR13C9Q8NGT0 318 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 LMX1AQ8TE12 382 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 SLC39A13Q96H72 371 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ACTR3CQ9C0K3 210 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 DUSP22Q9NRW4 184 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 KLRC4-KLRK1H3BQV0 150 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 MTCP1P56278 107 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 SMIM21Q3B7S5 101 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 LHFPL2Q6ZUX7 228 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 NLRC3Q7RTR2 1065 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 TCEAL8Q8IYN2 117 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 PP6455Q8WZ26 134 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 KCNK6Q9Y257 313 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF840PA6NDX5 716 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF732B4DXR9 585 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 GSTP1P09211 210 aaKnown RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 TPMTP51580 245 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 UNC50Q53HI1 259 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ACOT4Q8N9L9 421 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 DMBX1Q8NFW5 382 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ST8SIA1Q92185 356 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 VCX2Q9H322 139 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 IL21RQ9HBE5 538 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 HRASLSQ9HDD0 168 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 OBP2AQ9NY56 170 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF346Q9UL40 294 aaKnown RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 PLXNB3Q9ULL4 1909 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 TNCP24821 2201 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ARPC1BO15143 372 aaKnown RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 MRPL3P09001 348 aaKnown RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 SH3BP2P78314 561 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 MBTPS1Q14703 1052 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 CBLL1Q75N03 491 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 H2BFWTQ7Z2G1 175 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 PPP1R3BQ86XI6 285 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 NETO2Q8NC67 525 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 SLC23A2Q9UGH3 650 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 PGAP2Q9UHJ9 254 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF443Q9Y2A4 671 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 MRPL33O75394 65 aaKnown RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 IGFBP7Q16270 282 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF239Q16600 458 aaKnown RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 HNRNPA1L2Q32P51 320 aaKnown RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 SYPL2Q5VXT5 272 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ALKBH2Q6NS38 261 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 FAHD2BQ6P2I3 314 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 DOK3Q7L591 496 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 REC114Q7Z4M0 266 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 RBM23Q86U06 439 aaKnown RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 PQLC3Q8N755 202 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 NTNG2Q96CW9 530 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 FAHD2AQ96GK7 314 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 MAP3K3Q99759 626 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 OR52D1Q9H346 318 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ACTL7AQ9Y615 435 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 NHSQ6T4R5 1651 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 CXorf49A8MYA2 514 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 TMEM97Q5BJF2 176 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 DCAF12Q5T6F0 453 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 STEAP3Q658P3 488 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 COL22A1Q8NFW1 1626 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 RBPMSQ93062 196 aaKnown RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 TMEM106AQ96A25 262 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ADIPOR1Q96A54 375 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 C10orf35Q96D05 121 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 SCLYQ96I15 445 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 HAND1O96004 215 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 POU3F2P20265 443 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 KCNQ1P51787 676 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ARG2P78540 354 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 C1orf94Q6P1W5 598 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 CLDN19Q8N6F1 224 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 RELL2Q8NC24 303 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 OR51S1Q8NGJ8 323 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 OR4K13Q8NH42 304 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 FKRPQ9H9S5 495 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 TMEM238LA0A1B0GVL6 79 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 A6NJY4 79 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 IDSB3KWA1 339 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 CPEP16870 476 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 FUT1P19526 365 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 AADACL3Q5VUY0 350 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 KDM4DQ6B0I6 523 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 Q6ZTK2 550 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 IGFN1Q86VF2 1251 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 SYS1Q8N2H4 156 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 KRTCAP2Q8N6L1 136 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 SMOQ99835 787 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 DECR2Q9NUI1 292 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 DNMT3BQ9UBC3 853 aaKnown RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 POMT2Q9UKY4 750 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 EML6Q6ZMW3 1958 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 M0QZ24 198 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 PIAS1O75925 651 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 DDNO94850 711 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 SEMA4FO95754 770 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 FUCA1P04066 466 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 BTF3P20290 206 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms