RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Tmem176bQ9R1Q6 263 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Xpr1Q9Z0U0 695 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Zfp54E9PW05 585 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Tmem200cJ3QK46 637 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Dll3O88516 592 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Spi1P17433 272 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 P2ry2P35383 373 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Acp5Q05117 327 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Ppp5cQ60676 499 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 IppkQ6P1C1 489 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Tas2r40Q7TQB8 319 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Impad1Q80V26 356 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Cldn34b3Q80ZS5 209 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Csnk1g2Q8BVP5 415 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Stbd1Q8C7E7 338 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Krtcap3Q8K177 240 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Uxs1Q91XL3 420 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Hrh4Q91ZY2 391 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Rnf32Q9JIT1 368 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Pard6gQ9JK84 382 aa16.75■□□□□ 0.27
Trim47-202ENSMUST00000106441 Gm15446D3Z5Y8 553 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Gm8220F6YKI2 213 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Susd5G3UW60 619 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 A630095N17RikJ3KMM7 116 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Cacna1bO55017 2327 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 CltbQ6IRU5 229 aaKnown RBP16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 D11Wsu47eQ6PIX9 558 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Gm5346Q7M766 736 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Kif26bQ7TNC6 2112 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 SinhcafQ8C8M1 221 aaKnown RBP16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Nsun3Q8CCT7 348 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Mrps23Q8VE22 177 aaKnown RBP16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Olfr883Q8VF64 309 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Olfr1424Q8VFV1 313 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 BniplQ99JU7 328 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Cmtm3Q99LJ5 184 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Chmp1b1Q99LU0 199 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Cdca3Q99M54 266 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Hoga1Q9DCU9 321 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Fbxw5Q9QXW2 573 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Ccl27Q9Z1X0 120 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Olfr1193A2AV13 318 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Vmn2r110E9PWD5 858 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Brd7O88665 651 aaKnown RBP16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Sod1P08228 154 aaKnown RBP16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Msx1P13297 303 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 SnrpbP27048 231 aaKnown RBP16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Cdx2P43241 311 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Cdk5r1P61809 307 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Tdpoz5Q6YCH1 340 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Zfp101Q8BP18 612 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Ankrd46Q8BTZ5 228 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Lsm10Q8QZX5 122 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Tor2aQ8R1J9 321 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Mrps18cQ8R2L5 143 aaKnown RBP16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Tmem5Q8VDX6 444 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Chchd2Q9D1L0 153 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Entpd4Q9DBT4 613 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Sectm1bQ9JL59 212 aa16.74■□□□□ 0.27
Trim47-202ENSMUST00000106441 Tcf20Q9EPQ8 1987 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Greb1Q3UHK3 1954 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Stpg3A2RSX4 306 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Gm5799E9Q2M1 201 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Zfp989H3BLB0 661 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 MdkP12025 140 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Oprd1P32300 372 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 P2rx1P51576 399 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 PitpnbP53811 271 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Tbx6P70327 436 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Nkx6-3Q3UHX8 262 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Taar7dQ5QD10 358 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 CalcrQ60755 533 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Il10rbQ61190 349 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Med16Q6PGF3 828 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Gpr119Q7TQP3 335 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 GgnQ80WJ1 673 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 GskipQ8BGR8 139 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 PhyhipQ8K0S0 330 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Olfr790Q8VGJ3 322 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Slc7a13Q91WN3 478 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Mrps16Q9CPX7 135 aaKnown RBP16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 MeltfQ9R0R1 738 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Padi1Q9Z185 662 aa16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Ckap5A2AGT5 2032 aaKnown RBP16.73■□□□□ 0.27
Trim47-202ENSMUST00000106441 Igkv15-103A0A140T8P3 115 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Olfr1224-ps1A3KGY4 311 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Slc30a4O35149 430 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Il1bP10749 269 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Egfbp2P36368 261 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Pou3f4P62515 361 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 SnrpnP63163 240 aaKnown RBP16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Sntb2Q61235 520 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 HeltQ7TS99 240 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Slc25a40Q8BGP6 337 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Q8BPC6 396 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Cacnb4Q8R0S4 519 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Uckl1Q91YL3 548 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Cops7aQ9CZ04 275 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Slc25a18Q9DB41 320 aa16.72■□□□□ 0.27
Trim47-202ENSMUST00000106441 Tmem176aQ9DCS1 244 aa16.72■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms