RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gpr176Q80WT4 515 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r23Q8R2D0 302 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ccdc59Q8R2N0 240 aaKnown RBP7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 BanpQ8VBU8 548 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc27a4Q91VE0 643 aaKnown RBP7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Btnl10Q9JK39 275 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Pde7bQ9QXQ1 446 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Trav12n-2A0A075B626 113 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Stpg3A2RSX4 306 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn2r49D3Z6L3 852 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 2610021A01RikE9Q0Q3 834 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 4930522L14RikE9QAG4 666 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn2r32K7N686 852 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 GzmmO08643 264 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn2r42O35192 852 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 P01634 136 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Etv1P41164 477 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ccr1l1P51676 356 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Acod1P54987 488 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Cldn18P56857 264 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fkbp14P59024 211 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 CtseP70269 397 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rps3aP97351 264 aaKnown RBP7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Smad5P97454 465 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Prdm6Q3UZD5 596 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Serpinf2Q61247 491 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ptp4a1Q63739 173 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ppp3r2Q63811 179 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Alg8Q6P8H8 526 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 AI987944Q7TPX5 406 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Jazf1Q80ZQ5 243 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 BpifcQ8C186 509 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 FRRS1Q8K385 592 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 St7lQ8K4P7 559 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Hus1bQ8K572 276 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr166Q8VGX2 312 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Sfxn2Q925N2 322 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rprd1bQ9CSU0 326 aaKnown RBP7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 NubplQ9CWD8 319 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Etv5Q9CXC9 510 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Supt7lQ9CZV5 412 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Spaca7Q9D2S4 182 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Q9DAY5 185 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Aloxe3Q9WV07 711 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm28576A0A087WRP6 222 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fam90a1aA2A4E2 429 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn2r16E9Q025 850 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Btbd16E9Q173 522 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fitm2P59266 262 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc25a33Q3TZX3 320 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Arhgef9Q3UTH8 516 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 C1rlQ3UZ09 482 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 HlxQ61670 476 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr1135Q7TR42 310 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Enkd1Q7TSV9 346 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 TxnipQ8BG60 397 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Cstf2Q8BIQ5 580 aaKnown RBP7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fam180aQ8BR21 173 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fahd1Q8R0F8 227 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r83Q8R287 306 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr215Q8VF82 310 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr820Q8VFU5 312 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr826Q8VFU6 313 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr825Q8VFU7 320 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc24a3Q99PD7 645 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 PudpQ9D5U5 234 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr937Q9EQB4 311 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Sgk3Q9ERE3 496 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ubqln2Q9QZM0 638 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Urb1Q571H0 2274 aaKnown RBP7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 A0A1W2P799 418 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr723E9PZU2 309 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr376E9Q4M1 320 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zfp707F6QUN2 391 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ccl22O88430 92 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Cox5aP12787 146 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vbp1P61759 196 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Shc1P98083 579 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Epha6Q62413 1035 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 SordQ64442 357 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rcor3Q6PGA0 451 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Hsh2dQ6VYH9 334 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tas2r136Q7TQA8 305 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zbtb26Q8C8S0 451 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc43a2Q8CGA3 568 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 RbksQ8R1Q9 323 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr732Q8VFT5 308 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr558Q8VGZ7 317 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Naalad2Q9CZR2 740 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Q9D1K7 174 aaKnown RBP7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tor3aQ9ER38 385 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Prg4Q9JM99 1054 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Syt8Q9R0N6 395 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Asic5Q9R0Y1 495 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 SetxA2AKX3 2646 aa7.86□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fnd3c2A2AP83 941 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Esp18A8R0V1 91 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Prps1l3G3UXL2 318 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr519K7N645 319 aa7.85□□□□□ -1.15
Trim39-201ENSMUST00000042717 CenpaO35216 134 aa7.85□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms