RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Igkv12-38A0A0G2JEI7 115 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 Nipsnap1O55125 284 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 Cer1O55233 272 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 Bdkrb2P32299 392 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 TigarQ8BZA9 269 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 GatcQ8CBY0 155 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 Nsun3Q8CCT7 348 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr160Q8VGE3 309 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr394Q8VGR5 310 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr73Q920P2 313 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 Htra3Q9D236 459 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 Cldn12Q9ET43 244 aa14.88□□□□□ -0.03
Trim28-201ENSMUST00000005705 Morn1A2RTS7 477 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Sult2a5K7N6K9 285 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Rps15P62843 145 aaKnown RBP14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Scml4Q80VG1 408 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Lkaaear1Q8BIG2 198 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Mtnr1bQ8CIQ6 364 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Ndc1Q8VCB1 673 aaKnown RBP14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr881Q8VF63 314 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr826Q8VFU6 313 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr825Q8VFU7 320 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Sucnr1Q99MT6 317 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Trbv2A0A0B4J1G8 114 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 P01667 111 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 P58686 83 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Anxa11P97384 503 aaKnown RBP14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 McptlQ00356 246 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Dag1Q62165 893 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Slitrk2Q810C0 846 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Rell2Q8BRJ3 303 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Q8C3I9 435 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 RergQ8R367 199 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr486Q8VFD0 314 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Plpp7Q91WB2 271 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 B3galnt1Q920V1 331 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Med31Q9CXU1 131 aaKnown RBP14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Raet1dQ9JI58 249 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gstz1Q9WVL0 216 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gm34653A0A1L1SR01 368 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Zfp345A2AQA1 561 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr1255A2AUA4 310 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Lao1B1ARV3 523 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Msl3l2G3X992 371 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gm3542K7N6U2 270 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Sult2a4L7N245 285 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 EllO08856 602 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Sp3O70494 783 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Ifi204P0DOV2 619 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 P18533 117 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Ly6dP35459 127 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Dhrs11Q3U0B3 260 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Lin54Q571G4 749 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 CebpeQ6PZD9 281 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Chst14Q80V53 376 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Mterf4Q8BVN4 346 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Rab43Q8CG50 210 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Pxdc1Q8JZU6 231 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr97Q8VFE1 310 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Dusp12Q9D0T2 339 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Tmem176bQ9R1Q6 263 aa14.87□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr1112A2ATA0 318 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 CK137956B1AYM9 596 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gm20518E9Q548 580 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 UgdhO70475 493 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Rplp0P14869 317 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Taf6Q62311 678 aaKnown RBP14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Znf728Q6P5C7 752 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Vrk1Q80X41 440 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Fbxo34Q80XI1 695 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Fbxl21Q8BFZ4 434 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Spata33Q8C624 132 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Tmem45bQ8VCZ2 278 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr99Q8VFE4 305 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Lap3Q9CPY7 519 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Slc35a4Q9D321 324 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr1084A0A1L1STZ9 313 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Nfkbil1O88995 381 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Ttf1Q62187 859 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Rrm2bQ6PEE3 351 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Amdhd2Q8JZV7 409 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Anapc10Q8K2H6 185 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Rhbdl1Q8VC82 373 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Acy3Q91XE4 318 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Med28Q920D3 178 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Rita1Q9D1H0 253 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Slc46a3Q9DC26 460 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Tspan4Q9DCK3 238 aa14.86□□□□□ -0.03
Trim28-201ENSMUST00000005705 Gm28961A0A087WPA5 222 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 AI182371A2AS37 356 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 SrsxB2RZI1 361 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Tmed7D3YZZ5 224 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Cdc20bD3Z3I0 519 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Ms4a18J3QN01 344 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 P01635 115 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Pou3f4P62515 361 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 MplQ08351 625 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Tgoln1Q62313 353 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 Olfr843Q7TRG4 313 aa14.85□□□□□ -0.03
Trim28-201ENSMUST00000005705 RinlQ80UW3 563 aa14.85□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms