RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 ClcnkaQ9WUB7 687 aa8.54□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Tnfrsf14A0A1W2P7D5 276 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Zfp169E9Q3R6 731 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Sub1P11031 127 aaKnown RBP8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Pou3f1P21952 449 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Pou3f2P31360 445 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 GifP52787 417 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Gm773Q3TML4 206 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 CfiQ61129 603 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Runx3Q64131 409 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 MffQ6PCP5 291 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 SelenoiQ80TA1 398 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 SetmarQ80UJ9 309 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Cdkn3Q810P3 211 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Olfr1093Q8VF14 322 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Slc39a8Q91W10 462 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Egln2Q91YE2 419 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Nudt21Q9CQF3 227 aaKnown RBP8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Zfp623Q9CY99 499 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Dusp6Q9DBB1 381 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Ly6iQ9WU67 134 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Vmn1r10W4VSP8 311 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Gm11361A0A1Y7VKY1 152 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Chst13D3Z6E3 336 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Gm20431E9PY39 371 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Gm10260F6YVP7 152 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Vmn1r122K7N726 305 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 DdostO54734 441 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Kcnj15O88932 375 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 P01881 257 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 P01882 290 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Rps18P62270 152 aaKnown RBP8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Pon2Q62086 354 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 SpicQ6P3D7 242 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Sema6dQ76KF0 1073 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Olfr1211Q7TR09 311 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Olfr128Q7TRJ1 308 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Plcxd3Q8BLJ3 321 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Nyap2Q8BM65 682 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 LdahQ8BVA5 326 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Noxa1Q8CJ00 444 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Srpx2Q8R054 468 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Olfr868Q8VFI8 309 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Olfr558Q8VGZ7 317 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Rbms1Q91W59 403 aaKnown RBP8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 BambiQ9D0L6 260 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Rnf186Q9D241 226 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Ca7Q9ERQ8 264 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Fgf21Q9JJN1 210 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 RbpmsQ9WVB0 197 aaKnown RBP8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Cdc7Q9Z0H0 564 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Chd1P40201 1711 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Cacna1dQ99246 2179 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Iglc4A0A0G2JEK5 104 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Vmn1r152E9Q9N3 307 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Gm19965J3QNY8 723 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Vmn2r66K7N6R9 851 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Vmn1r104L7N293 307 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Matn4O89029 624 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Cd93O89103 644 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Il5raP21183 415 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Tacr1P30548 407 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Olfr13P34984 310 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Pla2g7Q60963 440 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Sox17Q61473 419 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Smad2Q62432 467 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Olfr845Q7TRG2 312 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Olfr429Q7TRW1 312 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Q8BZE1 841 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Shisa4Q8CA71 197 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Nfatc4Q8K120 901 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Ak6Q8VCP8 172 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Olfr881Q8VF63 314 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Olfr870Q8VGG4 311 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Tmem19Q91W52 336 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 HaghQ99KB8 309 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Cyc1Q9D0M3 325 aaKnown RBP8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 OxsmQ9D404 459 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Ddx60E9PZQ1 1711 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Gm13276A0A087WR18 182 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Sp100O35892 482 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Amy1P00687 511 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 IapP24822 559 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Htr5aP30966 357 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Slc10a2P70172 348 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Adamts1P97857 968 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Gm1587Q3UT80 123 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Grb2Q60631 217 aaKnown RBP8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 QpctlQ8BH73 383 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Cpne4Q8BLR2 557 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Sertm1Q8CD78 107 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Slc35a3Q8R1T4 326 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Vmn1r234Q8R298 329 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Vmn1r30Q8R2D2 302 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Duoxa1Q8VE49 341 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Olfr734Q8VFT4 313 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Usp3Q91W36 520 aaKnown RBP8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Mob1aQ921Y0 216 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Lmntd1Q9D4C1 413 aa8.53□□□□□ -1.04
Ccdc47-201ENSMUST00000002043 Cyb5r1Q9DB73 305 aa8.53□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms