RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 WDFY3Q8IZQ1 3526 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 UBE2QL1A1L167 161 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 LINC00862A6NCI5 91 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 FOXS1O43638 330 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 GSTZ1O43708 216 aaPredicted RBP13.26□□□□□ -0.29
SCARB2-221ENST00000640341 UBL4AP11441 157 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 ZNF35P13682 527 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 ZNF74Q16587 644 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 OR7E24Q6IFN5 339 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 MDGA2Q7Z553 956 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 HAVCR1Q96D42 359 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 POLE3Q9NRF9 147 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 EFCAB7A8K855 629 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 NFYAP23511 347 aaPredicted RBP13.26□□□□□ -0.29
SCARB2-221ENST00000640341 CAPZA2P47755 286 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 LINC00114Q6XXX2 140 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 GLDNQ6ZMI3 551 aaPredicted RBP13.26□□□□□ -0.29
SCARB2-221ENST00000640341 OR4C16Q8NGL9 310 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 ELSPBP1Q96BH3 223 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 CXorf58Q96LI9 332 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 LMF2Q9BU23 707 aaKnown RBP13.26□□□□□ -0.29
SCARB2-221ENST00000640341 SCML1Q9UN30 329 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 FARSAQ9Y285 508 aaKnown RBP13.26□□□□□ -0.29
SCARB2-221ENST00000640341 TRIOBPQ9H2D6 2365 aa13.26□□□□□ -0.29
SCARB2-221ENST00000640341 XKRYO14609 159 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 SPDEFO95238 335 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 PRKACBP22694 351 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 GPR3P46089 330 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 GGTLC2Q14390 218 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 ETFDHQ16134 617 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 MESTQ5EB52 335 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 OR10K2Q6IF99 312 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 TTLL10Q6ZVT0 673 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 ZNF227Q86WZ6 799 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 OR2G2Q8NGZ5 317 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.25□□□□□ -0.29
SCARB2-221ENST00000640341 ATG5Q9H1Y0 275 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 EXO5Q9H790 373 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 MMP25Q9NPA2 562 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 KCNN3Q9UGI6 736 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 POMT2Q9UKY4 750 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 PRELID1Q9Y255 219 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 MED12Q93074 2177 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 VPS13AQ96RL7 3174 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 ANKRD20A5PA0PJZ0 165 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 DCDC2BA2VCK2 349 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 ARPC3O15145 178 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 UPK3AO75631 287 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 WISP1O95388 367 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 POU3F4P49335 361 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 GFERP55789 205 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 ZNF141Q15928 474 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 EXOSC6Q5RKV6 272 aaKnown RBP13.25□□□□□ -0.29
SCARB2-221ENST00000640341 SHISA6Q6ZSJ9 500 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 SLC16A9Q7RTY1 509 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 PMEPA1Q969W9 287 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 CHST6Q9GZX3 395 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 NKX2-4Q9H2Z4 354 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 ELOVL3Q9HB03 270 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 A0A1B0GUH1 482 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 CD3DP04234 171 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 SDHAP31040 664 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 BTN1A1Q13410 526 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 NKAIN2Q5VXU1 208 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 WBP2NLQ6ICG8 309 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 UNQ9370/PRO34162Q6UXP9 181 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 DUSP19Q8WTR2 217 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 METTL21AQ8WXB1 218 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 TSLPQ969D9 159 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 TAAR8Q969N4 342 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 CCDC74AQ96AQ1 378 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 MIB2Q96AX9 1013 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 TSPAN32Q96QS1 320 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 RTN4RQ9BZR6 473 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 TTYH1Q9H313 450 aaPredicted RBP13.25□□□□□ -0.29
SCARB2-221ENST00000640341 SEMA6CQ9H3T2 930 aa13.25□□□□□ -0.29
SCARB2-221ENST00000640341 DHCR7Q9UBM7 475 aaKnown RBP13.25□□□□□ -0.29
SCARB2-221ENST00000640341 TGM6O95932 706 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 RENP00797 406 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 VSIG10L2P0DP72 767 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 EGR4Q05215 589 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 ATXN7L3Q14CW9 347 aaPredicted RBP13.24□□□□□ -0.29
SCARB2-221ENST00000640341 SCGB2B2Q4G0G5 96 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 NDUFAF7Q7L592 441 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 TOE1Q96GM8 510 aaKnown RBP13.24□□□□□ -0.29
SCARB2-221ENST00000640341 TPSD1Q9BZJ3 242 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 ATXN7L1Q9ULK2 861 aaPredicted RBP13.24□□□□□ -0.29
SCARB2-221ENST00000640341 C2orf72A6NCS6 295 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 M0QYG6 137 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 CTDSPLO15194 276 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 SIGLEC5O15389 551 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 CDC40O60508 579 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCARB2-221ENST00000640341 SDC3O75056 442 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 CXCR1P25024 350 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 NUDT1P36639 197 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 SIGLEC14Q08ET2 396 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 SMAD2Q15796 467 aaKnown RBP13.24□□□□□ -0.29
SCARB2-221ENST00000640341 CLLU1Q5K131 121 aa13.24□□□□□ -0.29
SCARB2-221ENST00000640341 SLC35D3Q5M8T2 416 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms