RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 TBC1D28Q2M2D7 210 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 ZMAT1Q5H9K5 638 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 AP1ARQ63HQ0 302 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 TYW3Q6IPR3 259 aaKnown RBP9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 ZNF627Q7L945 461 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 ZNF584Q8IVC4 421 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 SLC22A9Q8IVM8 553 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 OR1J2Q8NGS2 313 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 PSMA8Q8TAA3 256 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 FOXB1Q99853 325 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 NUDT16L1Q9BRJ7 211 aaKnown RBP9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 SLC19A3Q9BZV2 496 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 DPH5Q9H2P9 285 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 C1orf198Q9H425 327 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 RNF121Q9H920 327 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 ATAD3AQ9NVI7 634 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 DCAF16Q9NXF7 216 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 SNX12Q9UMY4 172 aa9.18□□□□□ -0.94
PTP4A1-207ENST00000639568 TET2Q6N021 2002 aaPredicted RBP9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 PRAMEF27A3QJZ7 478 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 CEACAM18A8MTB9 384 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 SLC28A1O00337 649 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 FAAHO00519 579 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 ENTPD5O75356 428 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 AHSA1O95433 338 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 PTHP01270 115 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 WNT2P09544 360 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 PATE4P0C8F1 98 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 PNMTP11086 282 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 LAMP1P11279 417 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 ATP5F1P24539 256 aaPredicted RBP9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 MMP15P51511 669 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 COPZ1P61923 177 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 TNFAIP6P98066 277 aaPredicted RBP9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 EMX1Q04741 257 aaPredicted RBP9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 GNA13Q14344 377 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 CHI3L2Q15782 390 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 NSUN5P1Q3KNT7 163 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 ZNF718Q3SXZ3 478 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 PHYHD1Q5SRE7 291 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 CLEC6AQ6EIG7 209 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 PGBD2Q6P3X8 592 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 FRRS1Q6ZNA5 592 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 C6orf120Q7Z4R8 191 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 C20orf196Q8IYI0 205 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 TMEM123Q8N131 208 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 TMEM151AQ8N4L1 468 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 PAQR4Q8N4S7 273 aaPredicted RBP9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 NATD1Q8N6N6 113 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 CCNYL1Q8N7R7 359 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 SCCPDHQ8NBX0 429 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 OR7A2PQ8NGA2 310 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 OR4F17Q8NGA8 305 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 OR1J1Q8NGS3 322 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 OR6N1Q8NGY5 312 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 MFSD8Q8NHS3 518 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 XAGE5Q8WWM1 108 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 R3HDM4Q96D70 268 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 ZG16BQ96DA0 208 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 OR4F4Q96R69 305 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 ULBP2Q9BZM5 246 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 ZNF224Q9NZL3 707 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 ATP6V1HQ9UI12 483 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 USH1CQ9Y6N9 552 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 U3KQK5 164 aa9.17□□□□□ -0.94
PTP4A1-207ENST00000639568 ZSCAN5BA6NJL1 495 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 E9PQ18 207 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 ZNF500O60304 480 aaPredicted RBP9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 SNAP29O95721 258 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 GUSBP08236 651 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 INHBAP08476 426 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 TNFRSF1AP19438 455 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 CD33P20138 364 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 TNFSF4P23510 183 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 PRPH2P23942 346 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 MAGEA12P43365 314 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 PRKAA2P54646 552 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 RPL38P63173 70 aaKnown RBP9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 PLP2Q04941 152 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 HNRNPA0Q13151 305 aaKnown RBP9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 GPAT3Q53EU6 434 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 SLC35E4Q6ICL7 350 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 C11orf88Q6PI97 169 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 PIWIL3Q7Z3Z3 882 aaKnown RBP9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 SKA3Q8IX90 412 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 MIER2Q8N344 545 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 CADM2Q8N3J6 435 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 ZNF283Q8N7M2 679 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 ROPN1LQ96C74 230 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 L3HYPDHQ96EM0 354 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 SLC35G5Q96KT7 338 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 LRR1Q96L50 414 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 MECRQ9BV79 373 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 DPY30Q9C005 99 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 OR51I1Q9H343 314 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 A4GALTQ9NPC4 353 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 FBLN5Q9UBX5 448 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 CGGBP1Q9UFW8 167 aaPredicted RBP9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 MIOXQ9UGB7 285 aa9.16□□□□□ -0.94
PTP4A1-207ENST00000639568 TMED5Q9Y3A6 229 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms