RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ZNF566Q969W8 418 aa19.03■□□□□ 0.64
SCN1B-206ENST00000638536 MRPL13Q9BYD1 178 aaKnown RBP19.03■□□□□ 0.64
SCN1B-206ENST00000638536 ULBP2Q9BZM5 246 aa19.03■□□□□ 0.64
SCN1B-206ENST00000638536 AMDHD2Q9Y303 409 aa19.03■□□□□ 0.64
SCN1B-206ENST00000638536 RNF115Q9Y4L5 304 aa19.03■□□□□ 0.64
SCN1B-206ENST00000638536 HIVEP1P15822 2718 aa19.02■□□□□ 0.64
SCN1B-206ENST00000638536 ZNF99A8MXY4 864 aaPredicted RBP19.02■□□□□ 0.64
SCN1B-206ENST00000638536 TRMUO75648 421 aaKnown RBP19.02■□□□□ 0.64
SCN1B-206ENST00000638536 CD3EP07766 207 aa19.02■□□□□ 0.64
SCN1B-206ENST00000638536 CD53P19397 219 aa19.02■□□□□ 0.64
SCN1B-206ENST00000638536 MAGEA2P43356 314 aa19.02■□□□□ 0.64
SCN1B-206ENST00000638536 PRPS1P60891 318 aa19.02■□□□□ 0.64
SCN1B-206ENST00000638536 PPP1R8Q12972 351 aaKnown RBP19.02■□□□□ 0.64
SCN1B-206ENST00000638536 TOP3AQ13472 1001 aaPredicted RBP19.02■□□□□ 0.64
SCN1B-206ENST00000638536 MTX3Q5HYI7 312 aa19.02■□□□□ 0.64
SCN1B-206ENST00000638536 ZER1Q7Z7L7 766 aa19.02■□□□□ 0.64
SCN1B-206ENST00000638536 CLDN22Q8N7P3 220 aa19.02■□□□□ 0.64
SCN1B-206ENST00000638536 AKAP1Q92667 903 aaKnown RBP eCLIP19.02■□□□□ 0.64
SCN1B-206ENST00000638536 ZNF346Q9UL40 294 aaKnown RBP19.02■□□□□ 0.64
SCN1B-206ENST00000638536 SHISA9B4DS77 424 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 MCIDASD6RGH6 385 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 ABCD4O14678 606 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 GSC2O15499 205 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 PTP4A3O75365 173 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 CD40P25942 277 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 FXYD6P3P58550 94 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 CTXN1P60606 82 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 HIST3H3Q16695 136 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 DNAL1Q4LDG9 190 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 CDK20Q8IZL9 346 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 HDAC2Q92769 488 aaKnown RBP19.01■□□□□ 0.63
SCN1B-206ENST00000638536 ALPK1Q96QP1 1244 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 TXNIPQ9H3M7 391 aa19.01■□□□□ 0.63
SCN1B-206ENST00000638536 TEP1Q99973 2627 aaKnown RBP19.01■□□□□ 0.63
SCN1B-206ENST00000638536 IGKV1D-43A0A0B4J1Z2 117 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 DNAJC8O75937 253 aaPredicted RBP19■□□□□ 0.63
SCN1B-206ENST00000638536 RAF1P04049 648 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 QDPRP09417 244 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 B4GALT1P15291 398 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 ACADSP16219 412 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 HOXC12P31275 282 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 SLC9A3P48764 834 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 SH3BGRP55822 239 aaPredicted RBP19■□□□□ 0.63
SCN1B-206ENST00000638536 TRAP1Q12931 704 aaKnown RBP19■□□□□ 0.63
SCN1B-206ENST00000638536 KEAP1Q14145 624 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 ZBED5Q49AG3 693 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 KLHL24Q6TFL4 600 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 MYPOPQ86VE0 399 aaPredicted RBP19■□□□□ 0.63
SCN1B-206ENST00000638536 MAGEE2Q8TD90 523 aaPredicted RBP19■□□□□ 0.63
SCN1B-206ENST00000638536 TSPAN32Q96QS1 320 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 SEC61A2Q9H9S3 476 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 VNN3Q9NY84 501 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 IL20RAQ9UHF4 553 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 SIGLEC7Q9Y286 467 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 F8P00451 2351 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 ARPC4-TTLL3A0A0A6YYG9 625 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 IGHG1P01857 330 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 ERFP50548 548 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 DAP3P51398 398 aaKnown RBP19■□□□□ 0.63
SCN1B-206ENST00000638536 THSD4Q6ZMP0 1018 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
SCN1B-206ENST00000638536 NOXO1Q8NFA2 376 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 NINJ1Q92982 152 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 MCHR2Q969V1 340 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 FOXB1Q99853 325 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 MAGIXQ9H6Y5 334 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 NOX3Q9HBY0 568 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 B3GAT2Q9NPZ5 323 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 ZNF224Q9NZL3 707 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 ADAM18Q9Y3Q7 739 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 LYVE1Q9Y5Y7 322 aa19■□□□□ 0.63
SCN1B-206ENST00000638536 HS3ST1O14792 307 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 CELA3BP08861 270 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 DNASE1P24855 282 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 CLRN1P58418 232 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 UBE2NP61088 152 aaKnown RBP18.99■□□□□ 0.63
SCN1B-206ENST00000638536 RPL27P61353 136 aaKnown RBP18.99■□□□□ 0.63
SCN1B-206ENST00000638536 ERVK-25P63136 954 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 FMODQ06828 376 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 TESK1Q15569 626 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 TMEM108Q6UXF1 575 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 ZNF813Q6ZN06 617 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 ZNF627Q7L945 461 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 SSX8Q7RTT4 187 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 ADGRG5Q8IZF4 528 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 FGFBP3Q8TAT2 258 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 NMD3Q96D46 503 aaKnown RBP18.99■□□□□ 0.63
SCN1B-206ENST00000638536 KATNB1Q9BVA0 655 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 POMPQ9Y244 141 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 TMEM5Q9Y2B1 443 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 POFUT2Q9Y2G5 429 aa18.99■□□□□ 0.63
SCN1B-206ENST00000638536 IGHV1-18A0A0C4DH31 117 aa18.98■□□□□ 0.63
SCN1B-206ENST00000638536 NPIPB13A6NJU9 1138 aa18.98■□□□□ 0.63
SCN1B-206ENST00000638536 NPIPB4C9JG80 1138 aa18.98■□□□□ 0.63
SCN1B-206ENST00000638536 SLC2A10O95528 541 aa18.98■□□□□ 0.63
SCN1B-206ENST00000638536 WNT11O96014 354 aa18.98■□□□□ 0.63
SCN1B-206ENST00000638536 IGHMP01871 453 aa18.98■□□□□ 0.63
SCN1B-206ENST00000638536 HLA-HP01893 362 aa18.98■□□□□ 0.63
SCN1B-206ENST00000638536 PTAFRP25105 342 aa18.98■□□□□ 0.63
SCN1B-206ENST00000638536 HMGA2P52926 109 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms