RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 INMTO95050 263 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 ADRA2AP08913 450 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 SBK2P0C263 348 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 CLUP10909 449 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 IFNGR1P15260 489 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 ZNF708P17019 499 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 CRABP1P29762 137 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 LHX2P50458 406 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 GTF2A1P52655 376 aaPredicted RBP13.72□□□□□ -0.21
CLN6-219ENST00000637329 CLDN20P56880 219 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 MELKQ14680 651 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 INAQ16352 499 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 EEF1A1P5Q5VTE0 462 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 FOXB2Q5VYV0 432 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 TMEM225Q6GV28 225 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 ABLIM2Q6H8Q1 611 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 INO80CQ6PI98 192 aaPredicted RBP13.72□□□□□ -0.21
CLN6-219ENST00000637329 NHLRC1Q6VVB1 395 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 ZBTB46Q86UZ6 589 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 ACBD7Q8N6N7 88 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 NANOGP1Q8N7R0 232 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 OR52N1Q8NH53 320 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 FNDC8Q8TC99 324 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 ZPLD1Q8TCW7 415 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 TMIGD2Q96BF3 282 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 DGCR14Q96DF8 476 aaKnown RBP13.72□□□□□ -0.21
CLN6-219ENST00000637329 COG8Q96MW5 612 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 KCNK17Q96T54 332 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 SYT4Q9H2B2 425 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 ASB6Q9NWX5 421 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 TAS2R16Q9NYV7 291 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 KLHL13Q9P2N7 655 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 CEPT1Q9Y6K0 416 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 TENM4Q6N022 2769 aa13.72□□□□□ -0.21
CLN6-219ENST00000637329 NCKAP5O14513 1909 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 SLC22A23A1A5C7 686 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 MKRN2OSH3BPM6 223 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 AKAP8O43823 692 aaKnown RBP13.71□□□□□ -0.21
CLN6-219ENST00000637329 NOL3O60936 208 aaKnown RBP13.71□□□□□ -0.21
CLN6-219ENST00000637329 C1QL1O75973 258 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 OPN1LWP04000 364 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 GYPBP06028 91 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 LCKP06239 509 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 HLA-DOBP13765 273 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 ZNF24P17028 368 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 ZNF43P17038 809 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 ENPP1P22413 925 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 RFC3P40938 356 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 WNT4P56705 351 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 TMPRSS3P57727 454 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 SLC10A1Q14973 349 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 TIGD6Q17RP2 521 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 LINC01590Q5TEZ4 76 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 TRILQ7L0X0 811 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 LURAP1LQ8IV03 231 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 MEIOBQ8N635 442 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 NOXO1Q8NFA2 376 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 OR4F15Q8NGB8 312 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 OR6X1Q8NH79 312 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 OR10D3Q8NH80 312 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 MRPL48Q96GC5 212 aaKnown RBP13.71□□□□□ -0.21
CLN6-219ENST00000637329 MNTQ99583 582 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 SLC6A15Q9H2J7 730 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 MARCH7Q9H992 704 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 ISYNA1Q9NPH2 558 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 ERVK13-1Q9NX77 482 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 RSL24D1Q9UHA3 163 aaKnown RBP13.71□□□□□ -0.21
CLN6-219ENST00000637329 CSAG2Q9Y5P2 127 aa13.71□□□□□ -0.21
CLN6-219ENST00000637329 CELSR3Q9NYQ7 3312 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 C12orf71A8MTZ7 269 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 ZNF814B7Z6K7 855 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 H7C1C5 153 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 TFECO14948 347 aaPredicted RBP13.7□□□□□ -0.22
CLN6-219ENST00000637329 SMAD9O15198 467 aaKnown RBP13.7□□□□□ -0.22
CLN6-219ENST00000637329 TRMUO75648 421 aaKnown RBP13.7□□□□□ -0.22
CLN6-219ENST00000637329 IGHG1P01857 330 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 IGHG3P01860 377 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 CELA3AP09093 270 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 LIMS3P0CW19 117 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 LIMS4P0CW20 117 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 ETV1P50549 477 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 TMBIM6P55061 237 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 CLDN18P56856 261 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 CARD18P57730 90 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 RPS3AP61247 264 aaKnown RBP13.7□□□□□ -0.22
CLN6-219ENST00000637329 LCN6P62502 163 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 HSF2Q03933 536 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 MLLT11Q13015 90 aaPredicted RBP13.7□□□□□ -0.22
CLN6-219ENST00000637329 ZNF169Q14929 603 aaPredicted RBP13.7□□□□□ -0.22
CLN6-219ENST00000637329 SPHARQ15513 63 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 SHFQ7M4L6 423 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 GPAT4Q86UL3 456 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 CLVS1Q8IUQ0 354 aaPredicted RBP13.7□□□□□ -0.22
CLN6-219ENST00000637329 PM20D2Q8IYS1 436 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 ZNF843Q8N446 348 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 KLHL36Q8N4N3 616 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 OR6K6Q8NGW6 343 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 NEIL3Q8TAT5 605 aa13.7□□□□□ -0.22
CLN6-219ENST00000637329 RAB2BQ8WUD1 216 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms