RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ADH7P40394 386 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 MTNR1AP48039 350 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 CDH11P55287 796 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 SQSTM1Q13501 440 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 OR2G6Q5TZ20 316 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 YOD1Q5VVQ6 348 aaPredicted RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 FAM199XQ6PEV8 388 aaPredicted RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 RABEPKQ7Z6M1 372 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 MARCH3Q86UD3 253 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 PPP1R3BQ86XI6 285 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 OR1N1Q8NGS0 311 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 OR14A16Q8NHC5 309 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 KIAA1143Q96AT1 154 aaPredicted RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 WWTR1Q9GZV5 400 aa10.47□□□□□ -0.73
CLN6-217ENST00000636964 EP300Q09472 2414 aaPredicted RBP10.47□□□□□ -0.73
CLN6-217ENST00000636964 EFCAB7A8K855 629 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 INMT-MINDY4F8WBC2 141 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 G3V3Q6 166 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 LDLRAD4O15165 306 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 CER1O95813 267 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 ANKRD34CP0C6C1 535 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 NR2C1P13056 603 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 PTAFRP25105 342 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 BTCP35070 178 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 ZNF273Q14593 569 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 TMEM91Q6ZNR0 172 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 TMPRSS11FQ6ZWK6 438 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 NLRC3Q7RTR2 1065 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 SLC29A4Q7RTT9 530 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 LHFPL3Q86UP9 236 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 CLDN22Q8N7P3 220 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 NANOGP1Q8N7R0 232 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 Q8NFD4 153 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 C8orf44Q96CB5 159 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 PAPOLGQ9BWT3 736 aaKnown RBP10.46□□□□□ -0.73
CLN6-217ENST00000636964 HCAR1Q9BXC0 346 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 ARRDC1-AS1Q9H2J1 176 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 COMMD3Q9UBI1 195 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 EIF1BO60739 113 aaKnown RBP10.46□□□□□ -0.73
CLN6-217ENST00000636964 NCR1O76036 304 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 PPP1R3DO95685 299 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 IL1AP01583 271 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 ZNF806P0C7X5 589 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 EIF1P41567 113 aaKnown RBP10.46□□□□□ -0.73
CLN6-217ENST00000636964 CTBP2P56545 445 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 DCDP81605 110 aaKnown RBP10.46□□□□□ -0.73
CLN6-217ENST00000636964 PLCXD2Q0VAA5 305 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 SLC25A30Q5SVS4 291 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 PEAR1Q5VY43 1037 aaPredicted RBP10.46□□□□□ -0.73
CLN6-217ENST00000636964 GDPGP1Q6ZNW5 385 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 CYB561A3Q8NBI2 242 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 HSD17B8Q92506 261 aa10.46□□□□□ -0.73
CLN6-217ENST00000636964 RBPMSQ93062 196 aaKnown RBP10.46□□□□□ -0.73
CLN6-217ENST00000636964 MRPL48Q96GC5 212 aaKnown RBP10.46□□□□□ -0.73
CLN6-217ENST00000636964 H2AFY2Q9P0M6 372 aaPredicted RBP10.46□□□□□ -0.73
CLN6-217ENST00000636964 KNTC1P50748 2209 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 BHLHE40O14503 412 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 HCN1O60741 890 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 RAB36O95755 333 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 GUSBP08236 651 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 CCL4P13236 92 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 CD79BP40259 229 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 SLC16A1P53985 500 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 GAS1P54826 345 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 SPCS3P61009 180 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 RPS25P62851 125 aaKnown RBP10.46□□□□□ -0.74
CLN6-217ENST00000636964 THEM4Q5T1C6 240 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 DDI2Q5TDH0 399 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 KDF1Q8NAX2 398 aaPredicted RBP10.46□□□□□ -0.74
CLN6-217ENST00000636964 PLPP5Q8NEB5 264 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 BRIX1Q8TDN6 353 aaKnown RBP10.46□□□□□ -0.74
CLN6-217ENST00000636964 TM9SF4Q92544 642 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 C3orf49Q96BT1 292 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 LURAP1Q96LR2 239 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 SLC19A3Q9BZV2 496 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 SHARPINQ9H0F6 387 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 ZCCHC4Q9H5U6 513 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 COA4Q9NYJ1 87 aa10.46□□□□□ -0.74
CLN6-217ENST00000636964 MPDZO75970 2070 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 RCBTB2O95199 551 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 MBP02144 154 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 ACSM4P0C7M7 580 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 ZNF28P17035 718 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 ITPKBP27987 946 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 ABCD3P28288 659 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 KLHL12Q53G59 568 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 BCL2L15Q5TBC7 163 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 SLC23A3Q6PIS1 610 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 CXXC5Q7LFL8 322 aaKnown RBP10.45□□□□□ -0.74
CLN6-217ENST00000636964 SSX9Q7RTT3 188 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 CMIPQ8IY22 773 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 GATAD2BQ8WXI9 593 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 ZNF426Q9BUY5 554 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 SLC35A3Q9Y2D2 325 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 SF3B6Q9Y3B4 125 aaKnown RBP10.45□□□□□ -0.74
CLN6-217ENST00000636964 KIF26BQ2KJY2 2108 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 PCNX3Q9H6A9 2034 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 C2orf72A6NCS6 295 aa10.45□□□□□ -0.74
CLN6-217ENST00000636964 KDM4EB2RXH2 506 aaPredicted RBP10.45□□□□□ -0.74
CLN6-217ENST00000636964 ZNF264O43296 627 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms