RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CEACAM7Q14002 265 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 RBMS2Q15434 407 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 OR4D1Q15615 310 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 APOOLQ6UXV4 268 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 TMPRSS11FQ6ZWK6 438 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 NAGSQ8N159 534 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 PGBD5Q8N414 524 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM217Q8N7C4 229 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 MFSD9Q8NBP5 474 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 OR8J2Q8NGG1 315 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 OR5K2Q8NHB8 316 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 INPP5KQ9BT40 448 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 P4HTMQ9NXG6 502 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 K7EQS6 105 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 GPR37O15354 613 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 SIAH2O43255 324 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 PTTG1O95997 202 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 BMP1P13497 986 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 GM2AP17900 193 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 GLRA1P23415 457 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ACKR3P25106 362 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 NTHL1P78549 312 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 GTF2H5Q6ZYL4 71 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM200AQ86VY9 491 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 NAXDQ8IW45 347 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 OR5AS1Q8N127 324 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 OR2T11Q8NH01 316 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 APH1BQ8WW43 257 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 TMIGD2Q96BF3 282 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 FYTTD1Q96QD9 318 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 NTMT1Q9BV86 223 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 COMMD5Q9GZQ3 224 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 LINC00597Q9H2U6 94 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 PLK3Q9H4B4 646 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 SPACA1Q9HBV2 294 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 EMC7Q9NPA0 242 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 OR52A1Q9UKL2 312 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 FAM208AQ9UK61 1670 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 FDXRP22570 491 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 OPRD1P41143 372 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ETV4P43268 484 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 SRP9P49458 86 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 RACK1P63244 317 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 TNFRSF17Q02223 184 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 MRPL2Q5T653 305 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 NLRP8Q86W28 1048 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 MEX3DQ86XN8 651 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 MFSD4AQ8N468 514 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 NKAIN3Q8N8D7 197 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 MRPL43Q8N983 215 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 OR9Q2Q8NGE9 314 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 WBP2Q969T9 261 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 CCDC74BQ96LY2 380 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 HCFC1R1Q9NWW0 138 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 EXO1Q9UQ84 846 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ARL2-SNX15V9GYD0 113 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 H0YGG7 62 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 NXPH3O95157 252 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 F13BP05160 661 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 OR5H8P0DN80 308 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 KEAP1Q14145 624 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 RAB6CQ53S08 254 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 PLAG1Q6DJT9 500 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 STEAP1BQ6NZ63 245 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 TFAP2EQ6VUC0 442 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 DEFB123Q8N688 67 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 UTP4Q969X6 686 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 PINX1Q96BK5 328 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 L3HYPDHQ96EM0 354 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 GRAMD2BQ96HH9 432 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 SLC30A3Q99726 388 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF251Q9BRH9 671 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 CORINQ9Y5Q5 1042 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 NUMBLQ9Y6R0 609 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 NUP205Q92621 2012 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM82A0PJX8 343 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 XRCC3O43542 346 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 TNFRSF1BP20333 461 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 VASH2Q86V25 355 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF573Q86YE8 665 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 LACC1Q8IV20 430 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 RPL3LQ92901 407 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 NEIL2Q969S2 332 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 DEFB127Q9H1M4 99 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 AKAP12Q02952 1782 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 CACNA1CQ13936 2221 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 KIR2DS1A0A191URI9 304 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 A0A1B0GX78 115 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 KRBOX1C9JBD0 128 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ARHGAP33O14559 1287 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 MT-ND4LP03901 98 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 HTR2CP28335 458 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 KIR2DS4P43632 304 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 PPP2CAP67775 309 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 COL9A2Q14055 689 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 KIR2DS1Q14954 304 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ADIRFQ15847 76 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ADPRMQ3LIE5 342 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 RPL22L1Q6P5R6 122 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 HTR3DQ70Z44 454 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms