RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 WDR45Q9Y484 360 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ALG6Q9Y672 507 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 AP4B1Q9Y6B7 739 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 PIEZO2Q9H5I5 2752 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 KIAA2026Q5HYC2 2103 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 MGAQ8IWI9 3026 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CELSR1Q9NYQ6 3014 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CRYBG3Q68DQ2 2970 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ASH1LQ9NR48 2969 aaKnown RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 TET2Q6N021 2002 aaPredicted RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 RP1L1Q8IWN7 2480 aaPredicted RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 FN1P02751 2386 aaKnown RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 FLNAP21333 2647 aaKnown RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 KALRNO60229 2985 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 POLQO75417 2590 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 ABCA12Q86UK0 2595 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 SEC16AO15027 2179 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 PLXNB1O43157 2135 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 IGKV2D-24A0A075B6R9 120 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 SYNJ2BP-COX16A0A087WUM0 186 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 TRBV6-6A0A0A6YYG2 114 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 IGHV1OR15-9A0A0B4J2B8 117 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 A0A0U1RQS6 177 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 ERICH2A1L162 156 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 SMCO2A6NFE2 343 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 FBLL1A6NHQ2 334 aaKnown RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 FAM47DPA6NHR8 397 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 LRRC30A6NM36 301 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 GJE1A6NN92 205 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 A8MUA0 341 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 ANKRD63C9JTQ0 380 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 E7ESA3 106 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 K7EM74 188 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 K7N7A8 449 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 SGK494L7N484 410 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 RASGRF2O14827 1237 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 TM9SF1O15321 606 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 SLC16A4O15374 487 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 STX7O15400 261 aaKnown RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 LATO43561 262 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 OR10H3O60404 316 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 HCN1O60741 890 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 RAMP1O60894 148 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 NEBLO76041 1014 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 B3GAT3O94766 335 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 KIAA0754O94854 1291 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 TOXO94900 526 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 AKR7A3O95154 331 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 NDUFA7O95182 113 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 SNAPINO95295 136 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 CTDNEP1O95476 244 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 PTBP3O95758 552 aaKnown RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 BAG2O95816 211 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 TGFAP01135 160 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 SEMG1P04279 462 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 PNMA6AP0CW24 399 aaPredicted RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 RBMY1CP0DJD4 496 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 CLUP10909 449 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 BCKDHAP12694 445 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 IGLL1P15814 213 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 GAP43P17677 238 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 XRCC1P18887 633 aaPredicted RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 MDKP21741 143 aaPredicted RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 MAPK3P27361 379 aaPredicted RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 HTR1EP28566 365 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 AQP1P29972 269 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 AXLP30530 894 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 HTR1FP30939 366 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 HNRNPH3P31942 346 aaKnown RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 YWHABP31946 246 aaKnown RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 PTGFRP43088 359 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 KIR2DS2P43631 304 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 ASMTP46597 345 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 BDKRB1P46663 353 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 RPS10P46783 165 aaKnown RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 RABIFP47224 123 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 IFNAR2P48551 515 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 PSMD8P48556 350 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 CSNK1DP48730 415 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 CASP4P49662 377 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 ACOT2P49753 483 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 PLK1P53350 603 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 CRYBB1P53674 252 aaPredicted RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 ATXN3P54252 364 aaPredicted RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 YBEYP58557 167 aaPredicted RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 STARD6P59095 220 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 PSMC5P62195 406 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 SELENOTP62341 195 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 ACTA1P68133 377 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 HSF2Q03933 536 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 CHRNB3Q05901 458 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 LAMTOR4Q0VGL1 99 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 GGTLC2Q14390 218 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 PDIA5Q14554 519 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 CEBPEQ15744 281 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 MPPED2Q15777 294 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 IL17AQ16552 155 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 NDUFA9Q16795 377 aa0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 TPD52L1Q16890 204 aaPredicted RBP0.73□□□□□ -2.29
SMARCB1-209ENST00000635578 TRIM16LQ309B1 348 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms