RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 SSX8Q7RTT4 187 aa12.36□□□□□ -0.43
CDK7-215ENST00000629350 ZCCHC24Q8N2G6 241 aaKnown RBP12.36□□□□□ -0.43
CDK7-215ENST00000629350 OR8J3Q8NGG0 315 aa12.36□□□□□ -0.43
CDK7-215ENST00000629350 ZNF317Q96PQ6 595 aaPredicted RBP12.36□□□□□ -0.43
CDK7-215ENST00000629350 KATNB1Q9BVA0 655 aa12.36□□□□□ -0.43
CDK7-215ENST00000629350 ASPNQ9BXN1 380 aa12.36□□□□□ -0.43
CDK7-215ENST00000629350 CA10Q9NS85 328 aa12.36□□□□□ -0.43
CDK7-215ENST00000629350 FAIMQ9NVQ4 179 aa12.36□□□□□ -0.43
CDK7-215ENST00000629350 CORINQ9Y5Q5 1042 aa12.36□□□□□ -0.43
CDK7-215ENST00000629350 ZNF99A8MXY4 864 aaPredicted RBP12.35□□□□□ -0.43
CDK7-215ENST00000629350 ADORA3P0DMS8 318 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 TROVE2P10155 538 aaKnown RBP eCLIP12.35□□□□□ -0.43
CDK7-215ENST00000629350 THBS4P35443 961 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 SH3BGRP55822 239 aaPredicted RBP12.35□□□□□ -0.43
CDK7-215ENST00000629350 UBE2NP61088 152 aaKnown RBP12.35□□□□□ -0.43
CDK7-215ENST00000629350 PIN1Q13526 163 aaPredicted RBP12.35□□□□□ -0.43
CDK7-215ENST00000629350 ETFDHQ16134 617 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 DEF8Q6ZN54 512 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 ABHD12BQ7Z5M8 362 aaPredicted RBP12.35□□□□□ -0.43
CDK7-215ENST00000629350 RBM15BQ8NDT2 890 aaKnown RBP12.35□□□□□ -0.43
CDK7-215ENST00000629350 PIK3C3Q8NEB9 887 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 BHLHE22Q8NFJ8 381 aaPredicted RBP12.35□□□□□ -0.43
CDK7-215ENST00000629350 OR5J2Q8NH18 312 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 EPYCQ99645 322 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 CCDC134Q9H6E4 229 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 FKRPQ9H9S5 495 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 OBP2BQ9NPH6 170 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 SH3GLB1Q9Y371 365 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 SNX13Q9Y5W8 968 aa12.35□□□□□ -0.43
CDK7-215ENST00000629350 TMEM129A0AVI4 362 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 OR6C65A6NJZ3 312 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 FAM220BPB1ANY3 271 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 OR4A8P0C604 315 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 ASAH2BP0C7U1 165 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 CBR1P16152 277 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 AHCYP23526 432 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 APOBEC3AP31941 199 aaPredicted RBP12.34□□□□□ -0.43
CDK7-215ENST00000629350 TAGLNQ01995 201 aaKnown RBP12.34□□□□□ -0.43
CDK7-215ENST00000629350 PIGFQ07326 219 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 LRRC23Q53EV4 343 aaPredicted RBP12.34□□□□□ -0.43
CDK7-215ENST00000629350 CYBRD1Q53TN4 286 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 COQ5Q5HYK3 327 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 ZNF813Q6ZN06 617 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 VTCN1Q7Z7D3 282 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 ZNF584Q8IVC4 421 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 CDK20Q8IZL9 346 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 SVOPLQ8N434 492 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 MOSPD2Q8NHP6 518 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 C10orf105Q8TEF2 133 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 TMEM54Q969K7 222 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 ULBP2Q9BZM5 246 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 MAN2C1Q9NTJ4 1040 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 SELENONQ9NZV5 590 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 NOX1Q9Y5S8 564 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 CAPN7Q9Y6W3 813 aa12.34□□□□□ -0.43
CDK7-215ENST00000629350 IGKV1D-43A0A0B4J1Z2 117 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 FAM171A2A8MVW0 826 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 J3KTA2 159 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 NME4O00746 187 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 MT-ATP6P00846 226 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 F13BP05160 661 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 ZNF14P17017 642 aaPredicted RBP12.33□□□□□ -0.44
CDK7-215ENST00000629350 CAPZA2P47755 286 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 RPL18Q07020 188 aaKnown RBP12.33□□□□□ -0.44
CDK7-215ENST00000629350 CYLC2Q14093 348 aaPredicted RBP12.33□□□□□ -0.44
CDK7-215ENST00000629350 KRT80Q6KB66 452 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 LRFN4Q6PJG9 635 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 SLC35D2Q76EJ3 337 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 ZNF627Q7L945 461 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 TSEN54Q7Z6J9 526 aaKnown RBP12.33□□□□□ -0.44
CDK7-215ENST00000629350 PXKQ7Z7A4 578 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 SLC30A8Q8IWU4 369 aa12.33□□□□□ -0.44
CDK7-215ENST00000629350 PAQR4Q8N4S7 273 aaPredicted RBP12.33□□□□□ -0.44
CDK7-215ENST00000629350 ADAD1Q96M93 576 aaKnown RBP12.33□□□□□ -0.44
CDK7-215ENST00000629350 BARX1Q9HBU1 254 aaPredicted RBP12.33□□□□□ -0.44
CDK7-215ENST00000629350 BBIP1A8MTZ0 92 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 VWC2LB2RUY7 222 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 FFAR1O14842 300 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 CD5LO43866 347 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 OR7A10O76100 309 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 CRYAAP02489 173 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 PGA4P0DJD7 388 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 PGA3P0DJD8 388 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 ZNF16P17020 682 aaPredicted RBP12.32□□□□□ -0.44
CDK7-215ENST00000629350 SERPINF1P36955 418 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 AQP2P41181 271 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 YAP1P46937 504 aaKnown RBP12.32□□□□□ -0.44
CDK7-215ENST00000629350 GIPRP48546 466 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 CSNK1A1P48729 337 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 MYBPC1Q00872 1141 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 SNTB2Q13425 540 aaKnown RBP12.32□□□□□ -0.44
CDK7-215ENST00000629350 TMEM249Q2WGJ8 235 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 C3orf36Q3SXR2 165 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 C8orf82Q6P1X6 216 aaPredicted RBP12.32□□□□□ -0.44
CDK7-215ENST00000629350 TTC33Q6PID6 262 aaPredicted RBP12.32□□□□□ -0.44
CDK7-215ENST00000629350 CLEC2AQ6UVW9 174 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 SHISA2Q6UWI4 295 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 LRP11Q86VZ4 500 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 SKA3Q8IX90 412 aa12.32□□□□□ -0.44
CDK7-215ENST00000629350 SLC15A3Q8IY34 581 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms