RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 CRYAAP02489 173 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 KDELR2P33947 212 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 OR1E2P47887 323 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 NUDT2P50583 147 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 FABP6P51161 128 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 SEC24CP53992 1094 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 RIPPLY3P57055 190 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 SELENOWP63302 87 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 ARF1P84077 181 aaKnown RBP5.59□□□□□ -1.51
TCF4-249ENST00000625716 LIPEQ05469 1076 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 CHRNB3Q05901 458 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 LGALS3BPQ08380 585 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 MS4A18Q3C1V0 323 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 TBRG1Q3YBR2 411 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 HIKESHIQ53FT3 197 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 CYBRD1Q53TN4 286 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 FKBP9P1Q75LS8 142 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 PXKQ7Z7A4 578 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 CCDC36Q8IYA8 594 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 WDR31Q8NA23 367 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 OR1K1Q8NGR3 316 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 OR6N1Q8NGY5 312 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 LILRB1Q8NHL6 650 aaPredicted RBP5.59□□□□□ -1.51
TCF4-249ENST00000625716 NEUROG1Q92886 237 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 C18orf12Q96KH6 178 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 ADAD1Q96M93 576 aaKnown RBP5.59□□□□□ -1.51
TCF4-249ENST00000625716 Q96MF0 132 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 HS6ST2Q96MM7 605 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 MOGAT1Q96PD6 335 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 ALKBH3Q96Q83 286 aaPredicted RBP5.59□□□□□ -1.51
TCF4-249ENST00000625716 OR2M2Q96R28 347 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 SLC19A3Q9BZV2 496 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 AMBRA1Q9C0C7 1298 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 PCDHAC1Q9H158 963 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 CRLF2Q9HC73 371 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 GPR35Q9HC97 309 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 NPAP1Q9NZP6 1156 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 RIMS3Q9UJD0 308 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 ZNF229Q9UJW7 825 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 POFUT2Q9Y2G5 429 aa5.59□□□□□ -1.51
TCF4-249ENST00000625716 ANKRD17O75179 2603 aaKnown RBP5.59□□□□□ -1.52
TCF4-249ENST00000625716 MPDZO75970 2070 aa5.59□□□□□ -1.52
TCF4-249ENST00000625716 CSMD1Q96PZ7 3565 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 ADGRG4Q8IZF6 3080 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 ARPC4-TTLL3A0A0A6YYG9 625 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 A0A1W2PRG6 482 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 SHISA9B4DS77 424 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 MCIDASD6RGH6 385 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 LRRN3E7EW58 273 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 BLOC1S5-TXNDC5H3BN57 136 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 RPL36A-HNRNPH2H7BZ11 118 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 CXCR6O00574 342 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 SMAD7O15105 426 aaKnown RBP5.58□□□□□ -1.52
TCF4-249ENST00000625716 SHOX2O60902 331 aaPredicted RBP5.58□□□□□ -1.52
TCF4-249ENST00000625716 FZD7O75084 574 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 ENTPD5O75356 428 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 OR5F1O95221 314 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 BCL10O95999 233 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 HPRP00739 348 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 MT-ND1P03886 318 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 IFNW1P05000 195 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 SOD3P08294 240 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 DANCRP0C864 163 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 THRBP10828 461 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 HLA-DOBP13765 273 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 PAX1P15863 534 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 TNFRSF1BP20333 461 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 PRDX6P30041 224 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 LSP1P33241 339 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 TTKP33981 857 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 CDKN1AP38936 164 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 RBM34P42696 430 aaKnown RBP5.58□□□□□ -1.52
TCF4-249ENST00000625716 CSNK1A1P48729 337 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 SLC7A2P52569 658 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 BIDP55957 195 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 GNGT1P63211 74 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 SRSF3P84103 164 aaKnown RBP5.58□□□□□ -1.52
TCF4-249ENST00000625716 LTBQ06643 244 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 ST3GAL3Q11203 375 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 ZP4Q12836 540 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 PIN1Q13526 163 aaPredicted RBP5.58□□□□□ -1.52
TCF4-249ENST00000625716 CAMK2DQ13557 499 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 RAB35Q15286 201 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 ETFDHQ16134 617 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 ZNF74Q16587 644 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 CEACAM16Q2WEN9 425 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 ZNF544Q6NX49 715 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 HACD2Q6Y1H2 254 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 SLC35D2Q76EJ3 337 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 RRM2BQ7LG56 351 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 HDDC2Q7Z4H3 204 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 NANOGNBQ7Z5D8 188 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 BIVMQ86UB2 503 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 CYP4Z1Q86W10 505 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 SLC15A3Q8IY34 581 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 C20orf196Q8IYI0 205 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 CDK20Q8IZL9 346 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 MUC15Q8N387 334 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 OR4D11Q8NGI4 311 aa5.58□□□□□ -1.52
TCF4-249ENST00000625716 MAGEE2Q8TD90 523 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms