RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ELOCQ15369 112 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 PDZD11Q5EBL8 140 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 OTUD1Q5VV17 481 aaPredicted RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 SLCO4C1Q6ZQN7 724 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ZNF610Q8N9Z0 462 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 TNFRSF13CQ96RJ3 184 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 TMEM231Q9H6L2 316 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 HSPB2A8KAH6 182 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 FTCDNL1E5RQL4 147 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 CCSO14618 274 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 PMP2P02689 132 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 EDN1P05305 212 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 SDHAP31040 664 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 CSF2RBP32927 897 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 SFTPDP35247 375 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 HSPB2Q16082 182 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 PDXPQ96GD0 296 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 GPR174Q9BXC1 333 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 PCDHB10Q9UN67 800 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 UNCXA6NJT0 531 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 ZNF724A8MTY0 619 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 CD81P60033 236 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 CAMK2BQ13554 666 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 ELAVL3Q14576 367 aaKnown RBP8.23□□□□□ -1.09
VCL-206ENST00000623461 PAQR6Q6TCH4 344 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 ABHD12BQ7Z5M8 362 aaPredicted RBP8.23□□□□□ -1.09
VCL-206ENST00000623461 RSPRY1Q96DX4 576 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 ZFYVE21Q9BQ24 234 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 NRAPQ86VF7 1730 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 HPNP05981 417 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 SBK3P0C264 359 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 METTL15P1P0C7V9 234 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 HLA-DOBP13765 273 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 AADACP22760 399 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 PLGLB1Q02325 96 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 CST9LP1Q5W188 147 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 OR2T2Q6IF00 324 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 C11orf87Q6NUJ2 197 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 OR9A4Q8NGU2 314 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 TVP23CQ96ET8 276 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 MRPS28Q9Y2Q9 187 aaKnown RBP8.23□□□□□ -1.09
VCL-206ENST00000623461 SCN4AP35499 1836 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 ATAD5Q96QE3 1844 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 RD3LP0DJH9 198 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 AFMIDQ63HM1 303 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 LYG2Q86SG7 212 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 CALHM3Q86XJ0 350 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 WDR92Q96MX6 357 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 BCO1Q9HAY6 547 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 RAB9BQ9NP90 201 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 V9GYS6 101 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 KIAA1217Q5T5P2 1943 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 CYB5BO43169 146 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 CD37P11049 281 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 DUSP1P28562 367 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 OR7E24Q6IFN5 339 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 ACSM5Q6NUN0 579 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 TMEM156Q8N614 296 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 TMEM255BQ8WV15 326 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 BRI3BPQ8WY22 251 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 DUSP22Q9NRW4 184 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 TP53TG5Q9Y2B4 290 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 FAM96BQ9Y3D0 163 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 BTAF1O14981 1849 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 RPS18P62269 152 aaKnown RBP8.23□□□□□ -1.09
VCL-206ENST00000623461 ANKRD16Q6P6B7 361 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 C5orf46Q6UWT4 87 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 HSD17B11Q8NBQ5 300 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 OR5L2Q8NGL0 311 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 SGCZQ96LD1 299 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 FBRSQ9HAH7 460 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 SLC2A4RGQ9NR83 387 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 H7BYZ3 331 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 NME2P1O60361 137 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 B4GALT3O60512 393 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 SFTA3P0C7M3 94 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 TEAD1P28347 426 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 MELKQ14680 651 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 TEAD2Q15562 447 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 B3GNTL1Q67FW5 361 aaPredicted RBP8.23□□□□□ -1.09
VCL-206ENST00000623461 KLHDC1Q8N7A1 406 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 RCBTB1Q8NDN9 531 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 BVESQ8NE79 360 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 MSI2Q96DH6 328 aaKnown RBP8.23□□□□□ -1.09
VCL-206ENST00000623461 RNF150Q9ULK6 438 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 ZNF831Q5JPB2 1677 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 PAPPAQ13219 1627 aa8.23□□□□□ -1.09
VCL-206ENST00000623461 IFITM5A6NNB3 132 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 HOXA9P31269 272 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 CRYBB2P43320 205 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 RAB11AP62491 216 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 DOC2BQ14184 412 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 CLINT1Q14677 625 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 UBXN2BQ14CS0 331 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 IQCJQ1A5X6 159 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 TMEM31Q5JXX7 168 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 PGBD5Q8N414 524 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 STT3BQ8TCJ2 826 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 TM4SF18Q96CE8 201 aa8.22□□□□□ -1.09
VCL-206ENST00000623461 B3GALT5Q9Y2C3 310 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms