RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CCDC148Q8NFR7 591 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 NPBQ8NG41 125 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 OR4F15Q8NGB8 312 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 OR2G3Q8NGZ4 309 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 RHEBL1Q8TAI7 183 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 TSEN15Q8WW01 171 aaKnown RBP3.36□□□□□ -1.87
CPNE3-213ENST00000622183 TMEM54Q969K7 222 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 CCDC126Q96EE4 140 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 MED8Q96G25 268 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 PANX1Q96RD7 426 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 NRTNQ99748 197 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 ANP32EQ9BTT0 268 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 NANOGQ9H9S0 305 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 FGF20Q9NP95 211 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-213ENST00000622183 CAB39Q9Y376 341 aaPredicted RBP3.36□□□□□ -1.87
CPNE3-213ENST00000622183 MSH6P52701 1360 aa3.36□□□□□ -1.87
CPNE3-213ENST00000622183 IGKV1D-13A0A0B4J2D9 117 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 SERTM2A0A1B0GWG4 89 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 ZNF726A6NNF4 738 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 A8MU10 97 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 LSM1O15116 133 aaKnown RBP3.35□□□□□ -1.87
CPNE3-213ENST00000622183 EEDO75530 441 aaKnown RBP3.35□□□□□ -1.87
CPNE3-213ENST00000622183 CTAG2O75638 210 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 MOSP00540 346 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 IGHV4-34P06331 123 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 FGF4P08620 206 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 ANXA5P08758 320 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 IGKV1-13P0DP09 117 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 CRISP2P16562 243 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 TMED10P49755 219 aaKnown RBP3.35□□□□□ -1.87
CPNE3-213ENST00000622183 SSR4P51571 173 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 RAB10P61026 200 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 LY6G6FQ5SQ64 297 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 SCD5Q86SK9 330 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 THOC6Q86W42 341 aaKnown RBP3.35□□□□□ -1.87
CPNE3-213ENST00000622183 PDIK1LQ8N165 341 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 LIX1Q8N485 282 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 EID2Q8N6I1 236 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 FBXL13Q8NEE6 735 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 SDR42E1Q8WUS8 393 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 SGK3Q96BR1 496 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 SLC29A1Q99808 456 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 MTG1Q9BT17 334 aaPredicted RBP3.35□□□□□ -1.87
CPNE3-213ENST00000622183 OR51M1Q9H341 326 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 NXF3Q9H4D5 531 aaKnown RBP3.35□□□□□ -1.87
CPNE3-213ENST00000622183 GEMIN7Q9H840 131 aaKnown RBP3.35□□□□□ -1.87
CPNE3-213ENST00000622183 UGT1A7Q9HAW7 530 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 UGT1A10Q9HAW8 530 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 UGT1A8Q9HAW9 530 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 GPATCH2LQ9NWQ4 482 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 KIAA1257Q9ULG3 409 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 VANGL2Q9ULK5 521 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 CNTNAP1P78357 1384 aa3.35□□□□□ -1.87
CPNE3-213ENST00000622183 A0A0B4J2A0 478 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 LRRIQ3A6PVS8 624 aaPredicted RBP3.34□□□□□ -1.87
CPNE3-213ENST00000622183 PEX7O00628 323 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 PPP1R2P9O14990 202 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 MRPS12O15235 138 aaKnown RBP3.34□□□□□ -1.87
CPNE3-213ENST00000622183 ZNF861PO60384 105 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 CSF3P09919 207 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 IGHV3-43DP0DP04 118 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 ANXA8P13928 327 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 CCNE1P24864 410 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 RORCP51449 518 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 FGF8P55075 233 aaPredicted RBP3.34□□□□□ -1.87
CPNE3-213ENST00000622183 MERTKQ12866 999 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 MRPL23Q16540 153 aaKnown RBP3.34□□□□□ -1.87
CPNE3-213ENST00000622183 SGCAQ16586 387 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 ANXA8L1Q5VT79 327 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 FRMPD2BQ6IN97 320 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 LCN12Q6JVE5 192 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 LUZP2Q86TE4 346 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 FAM71E2Q8N5Q1 922 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 ACER1Q8TDN7 264 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 CXorf40AQ8TE69 158 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 RDH5Q92781 318 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 ELSPBP1Q96BH3 223 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 ZIM3Q96PE6 472 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 OR2M2Q96R28 347 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 SH3GL3Q99963 347 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 ECSITQ9BQ95 431 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 C11orf70Q9BRQ4 267 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 NCOR1P1Q9H4R4 102 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 GCNT4Q9P109 453 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 SHPKQ9UHJ6 478 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 NUFIP1Q9UHK0 495 aaKnown RBP3.34□□□□□ -1.87
CPNE3-213ENST00000622183 ZNF225Q9UK10 706 aa3.34□□□□□ -1.87
CPNE3-213ENST00000622183 A0A1B0GVI7 797 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 WRBO00258 174 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 CDC7O00311 574 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 AIM2O14862 343 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 CHST1O43916 411 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 CLPXO76031 633 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 ZNF17P17021 662 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 NUDT1P36639 197 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 CCR8P51685 355 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 REG3AQ06141 175 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 AQP6Q13520 282 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 RFX4Q33E94 735 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 COA6Q5JTJ3 125 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms