RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 LDLRAD4O15165 306 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 TO15178 435 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 FADS1O60427 444 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SRPX2O60687 465 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 ICMTO60725 284 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 PRAF2O60831 178 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ICOSLGO75144 302 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ITGA10O75578 1167 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 CDC123O75794 336 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 KDM4BO94953 1096 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 NDUFB6O95139 128 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 LDOC1O95751 146 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 GPANK1O95872 356 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 CFDP00746 253 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 GIPP09681 153 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 RAB40ALP0C0E4 278 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 PNMTP11086 282 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 UBL4AP11441 157 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 CPN1P15169 458 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 NME1P15531 152 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 ZNF250P15622 560 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 IGFBP3P17936 291 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 SRMP19623 302 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 CXCL2P19875 107 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 FSTP19883 344 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ALOX5APP20292 161 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 PSMB1P20618 241 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 DNASE1P24855 282 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 LCN1P31025 176 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SDHAP31040 664 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 DCTDP32321 178 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 CSF2RBP32927 897 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 PTGS2P35354 604 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 RPL4P36578 427 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 NUDT1P36639 197 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 RPS27P42677 84 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 PPICP45877 212 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 INPP1P49441 399 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 MAP2K6P52564 334 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 AP2S1P53680 142 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 SCAND1P57086 179 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 CTXN1P60606 82 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 MRPS10P82664 201 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 PITPNAQ00169 270 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 INSM1Q01101 510 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 CFHR1Q03591 330 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 MFGE8Q08431 387 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 PUDPQ08623 228 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 C1orf61Q13536 156 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 EXOSC2Q13868 293 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 CBFBQ13951 182 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 EBPQ15125 230 aaKnown RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 PON3Q15166 354 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ZNHIT3Q15649 155 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 TOMM34Q15785 309 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 COL28A1Q2UY09 1125 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ELOA3BQ3SY89 546 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ESCO2Q56NI9 601 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ALG10Q5BKT4 473 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 EMC4Q5J8M3 183 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 WDR38Q5JTN6 314 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 CLLU1Q5K131 121 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 C1QL3Q5VWW1 255 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 LIPNQ5VXI9 398 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SLC22A10Q63ZE4 541 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ZNF626Q68DY1 528 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SIGIRRQ6IA17 410 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 FAAP20Q6NZ36 180 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 TMEM65Q6PI78 240 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 NHLRC1Q6VVB1 395 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 CHRDL2Q6WN34 429 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 GLDNQ6ZMI3 551 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 MAMSTRQ6ZN01 415 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 LRRC69Q6ZNQ3 347 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 FCRLAQ7L513 359 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 LINGO2Q7L985 606 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 KRT74Q7RTS7 529 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 KANSL1Q7Z3B3 1105 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 TAF8Q7Z7C8 310 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 PARGQ86W56 976 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 CATSPERDQ86XM0 798 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 TMEM151BQ8IW70 566 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SLC38A6Q8IZM9 456 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 OR6V1Q8N148 313 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SIX5Q8N196 739 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 METTL27Q8N6F8 245 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 GATSQ8NAP1 163 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 UXS1Q8NBZ7 420 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SMRP1Q8NCR6 262 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 DNAAF1Q8NEP3 725 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 BEST4Q8NFU0 473 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ELOA3Q8NG57 546 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 OR51A4Q8NGJ6 313 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 OR4C16Q8NGL9 310 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 OR6K6Q8NGW6 343 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 OTOSQ8NHW6 89 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 C1orf216Q8TAB5 229 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 SYNPRQ8TBG9 265 aa2.92□□□□□ -1.94
U1.39-201ENST00000621562 ZNF431Q8TF32 576 aaPredicted RBP2.92□□□□□ -1.94
U1.39-201ENST00000621562 SNX33Q8WV41 574 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms