RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ASB13Q8WXK3 278 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 MARC2Q969Z3 335 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 C1orf198Q9H425 327 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 KCNK15Q9H427 330 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 EXO5Q9H790 373 aa17.79■□□□□ 0.44
PDLIM3-212ENST00000620787 TRAV18A0A075B6X5 111 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 OR6C74A6NCV1 312 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 POM121BA6NF01 834 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 HRKO00198 91 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 PRAMEF2O60811 474 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 C4orf46Q504U0 113 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 LY6G6FQ5SQ64 297 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 LSM14AQ8ND56 463 aaKnown RBP17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 RCBTB1Q8NDN9 531 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 DUSP19Q8WTR2 217 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 DVL3Q92997 716 aaPredicted RBP17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 VSTM2LQ96N03 204 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 IKZF2Q9UKS7 526 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 SLC6A5Q9Y345 797 aa17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 ARHGEF17Q96PE2 2063 aaPredicted RBP17.78■□□□□ 0.44
PDLIM3-212ENST00000620787 TVP23AA6NH52 213 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 SIGLEC5O15389 551 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 EIF4E2O60573 245 aaKnown RBP17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 ZNF432O94892 652 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 CSTAP01040 98 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 POU2F2P09086 479 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 SIGLEC14Q08ET2 396 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 KCNAB1Q14722 419 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 C17orf107Q6ZR85 190 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 RD3Q7Z3Z2 195 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 SDR16C5Q8N3Y7 309 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 PRSS35Q8N3Z0 413 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 ZNF676Q8N7Q3 588 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 CLEC1AQ8NC01 280 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 ST8SIA2Q92186 375 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 ULBP3Q9BZM4 244 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 ITGB2P05107 769 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 CD14P08571 375 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 UBBP0CG47 229 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 UBCP0CG48 685 aaKnown RBP17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 CFPP27918 469 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 POU3F4P49335 361 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 RPS27AP62979 156 aaKnown RBP17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 UBA52P62987 128 aaKnown RBP17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 ZNF776Q68DI1 518 aaPredicted RBP17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 ENPP7Q6UWV6 458 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 MCATQ8IVS2 390 aaKnown RBP17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 MCHR2Q969V1 340 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 PAWRQ96IZ0 340 aaKnown RBP17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 COMMD4Q9H0A8 199 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 POFUT1Q9H488 388 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 SRA1Q9HD15 236 aaKnown RBP17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 LRIT1Q9P2V4 623 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 PCOLCE2Q9UKZ9 415 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 HIF3AQ9Y2N7 669 aa17.77■□□□□ 0.44
PDLIM3-212ENST00000620787 H3BUI4 141 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 MGMTP16455 207 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 ACTR1BP42025 376 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 PGDP52209 483 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 RAB38P57729 211 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 ACTR1AP61163 376 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 EIF2B5Q13144 721 aaKnown RBP17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 RUNX3Q13761 415 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 ZNF169Q14929 603 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 ODF4Q2M2E3 257 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 STEAP1BQ6NZ63 245 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 OR8S1Q8NH09 359 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 GPR148Q8TDV2 347 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 SPACA7Q96KW9 195 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 SLC19A3Q9BZV2 496 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 ALX4Q9H161 411 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 SLC6A17Q9H1V8 727 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 BARX1Q9HBU1 254 aaPredicted RBP17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 STARD5Q9NSY2 213 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 RASL12Q9NYN1 266 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 LAMP5Q9UJQ1 280 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 YBX2Q9Y2T7 364 aaKnown RBP17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 TMEM212A6NML5 194 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 RDH16O75452 317 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 WNT11O96014 354 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 ITGA5P08648 1049 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 ACHEP22303 614 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 SDHAP31040 664 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 PRSS3P35030 304 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 GPR18Q14330 331 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 NNATQ16517 81 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 OR10K1Q8NGX5 313 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 MOGAT1Q96PD6 335 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 ZNF416Q9BWM5 594 aa17.76■□□□□ 0.43
PDLIM3-212ENST00000620787 A6NCN8 305 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 SERINC4A6NH21 518 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 H7C1C5 153 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 AKR7A3O95154 331 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 PRKACAP17612 351 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 FCARP24071 287 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 RPS27P42677 84 aaKnown RBP17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 GRK6P43250 576 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 KIR3DL2P43630 455 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 CTXN1P60606 82 aa17.75■□□□□ 0.43
PDLIM3-212ENST00000620787 LCN6P62502 163 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms