RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 STAMBPO95630 424 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 BCL10O95999 233 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 ACADSP16219 412 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 GSSP48637 474 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 CSNK1A1P48729 337 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 ERVK-25P63136 954 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 TUBA1BP68363 451 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 TUBA4AP68366 448 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 ARF1P84077 181 aaKnown RBP9.45□□□□□ -0.9
TARDBP-223ENST00000620632 MYBPC1Q00872 1141 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 PPA1Q15181 289 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 HIST3H3Q16695 136 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 TBRG1Q3YBR2 411 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 HMBOX1Q6NT76 420 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 C1orf94Q6P1W5 598 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 LRFN4Q6PJG9 635 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 TUBA1AQ71U36 451 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 FAM122BQ7Z309 247 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 CDC20BQ86Y33 519 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 CDK20Q8IZL9 346 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 SYT14Q8NB59 555 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 PAPD5Q8NDF8 572 aaKnown RBP9.45□□□□□ -0.9
TARDBP-223ENST00000620632 NOXO1Q8NFA2 376 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 ZNF519Q8TB69 540 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 HSD17B8Q92506 261 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 HTRA1Q92743 480 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 ZNF566Q969W8 418 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 NMD3Q96D46 503 aaKnown RBP9.45□□□□□ -0.9
TARDBP-223ENST00000620632 PLPPR2Q96GM1 343 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 BOD1Q96IK1 185 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 ADAD1Q96M93 576 aaKnown RBP9.45□□□□□ -0.9
TARDBP-223ENST00000620632 KATNB1Q9BVA0 655 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 POLDIP3Q9BY77 421 aaKnown RBP9.45□□□□□ -0.9
TARDBP-223ENST00000620632 MMADHCQ9H3L0 296 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-223ENST00000620632 TXNIPQ9H3M7 391 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 PLEKHF2Q9H8W4 249 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 CCM2LQ9NUG4 571 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-223ENST00000620632 GLTPQ9NZD2 209 aa9.45□□□□□ -0.9
TARDBP-223ENST00000620632 SAMHD1Q9Y3Z3 626 aaKnown RBP9.45□□□□□ -0.9
TARDBP-223ENST00000620632 SPG11Q96JI7 2443 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 DPRXA6NFQ7 191 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 UNC119BA6NIH7 251 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 NPIPB13A6NJU9 1138 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 ZNF99A8MXY4 864 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-223ENST00000620632 NPIPB4C9JG80 1138 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 EBAG9O00559 213 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 IMPA2O14732 288 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 CST1P01037 141 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 GASTP01350 101 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 IGHG1P01857 330 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 FPR3P25089 353 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 DAP3P51398 398 aaKnown RBP9.44□□□□□ -0.9
TARDBP-223ENST00000620632 RPL27P61353 136 aaKnown RBP9.44□□□□□ -0.9
TARDBP-223ENST00000620632 FMODQ06828 376 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 ANKDD1AQ495B1 522 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 MESTQ5EB52 335 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 C1orf146Q5VVC0 180 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 OR7E24Q6IFN5 339 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 ABHD12BQ7Z5M8 362 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-223ENST00000620632 P2RY8Q86VZ1 359 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 HS3ST5Q8IZT8 346 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 C17orf78Q8N4C9 275 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 OR6N1Q8NGY5 312 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 POP5Q969H6 163 aaKnown RBP9.44□□□□□ -0.9
TARDBP-223ENST00000620632 MCHR2Q969V1 340 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 RASD2Q96D21 266 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 Q96M85 177 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 GPX7Q96SL4 187 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-223ENST00000620632 KCNK17Q96T54 332 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 C1QTNF6Q9BXI9 259 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 ULBP2Q9BZM5 246 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 REEP1Q9H902 201 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 NTN4Q9HB63 628 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 NOX3Q9HBY0 568 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 ZNF224Q9NZL3 707 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 TMCC3Q9ULS5 477 aa9.44□□□□□ -0.9
TARDBP-223ENST00000620632 PLCE1Q9P212 2302 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 RTTNQ86VV8 2226 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 H7C1C5 153 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 TIPRLO75663 272 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 CCNB2O95067 398 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 NDUFB2O95178 105 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 GOSR1O95249 250 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 SLC2A10O95528 541 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 TP53P04637 393 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-223ENST00000620632 CD14P08571 375 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 IGFBP1P08833 259 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-223ENST00000620632 QDPRP09417 244 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 B4GALT1P15291 398 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 RPL4P36578 427 aaKnown RBP9.43□□□□□ -0.9
TARDBP-223ENST00000620632 ACVR1BP36896 505 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 ZNF133P52736 654 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-223ENST00000620632 CLRN1P58418 232 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 PRPS1P60891 318 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 LCN6P62502 163 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 TGFBR3Q03167 851 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 BSPH1Q075Z2 132 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 SPOCK1Q08629 439 aa9.43□□□□□ -0.9
TARDBP-223ENST00000620632 DBPQ10586 325 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-223ENST00000620632 TSPAN31Q12999 210 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms