RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 GPER1Q99527 375 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 PIGQQ9BRB3 760 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 EXOSC3Q9NQT5 275 aaKnown RBP14.19□□□□□ -0.14
CPSF1-213ENST00000620219 PMF1-BGLAPU3KQ54 211 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 TDGF1P13385 188 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 LCN1P31025 176 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 CARD18P57730 90 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 RSBN1Q5VWQ0 802 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-213ENST00000620219 MRGPRX4Q96LA9 322 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 A6NIZ1 184 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 TNFRSF10AO00220 468 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 TNFSF11O14788 317 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 KHDRBS3O75525 346 aaKnown RBP14.19□□□□□ -0.14
CPSF1-213ENST00000620219 IGHG1P01857 330 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 CD46P15529 392 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 NAGAP17050 411 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 CSNK1A1P48729 337 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 RAP1BP61224 184 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 RAP1AP62834 184 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 TEKQ02763 1124 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 DOC2BQ14184 412 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 ETFDHQ16134 617 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 MRPL14Q6P1L8 145 aaKnown RBP14.19□□□□□ -0.14
CPSF1-213ENST00000620219 JAGN1Q8N5M9 183 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 CXCL13O43927 109 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 SERPINA7P05543 415 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 UMODP07911 640 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 ZNF883P0CG24 379 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 COX6A1P12074 109 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 SHC1P29353 583 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 TNFSF8P32971 234 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 FXYD6P3P58550 94 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 CSNK2A1P68400 391 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-213ENST00000620219 PLAURQ03405 335 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 E9PI62 339 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 F5H5K5 113 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 FADS1O60427 444 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 HLA-DOBP13765 273 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 DIO1P49895 249 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 OR5AK2Q8NH90 309 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 TXNDC15Q96J42 360 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 WDR76Q9H967 626 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 ZNF879B4DU55 563 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 IDH3BO43837 385 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 SIRPAP78324 504 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 HBMQ6B0K9 141 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 RDH10Q8IZV5 341 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 GPR137CQ8N3F9 429 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 PARP16Q8N5Y8 322 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 TSPAN32Q96QS1 320 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 BCL7BQ9BQE9 202 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 FKBP14Q9NWM8 211 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 TMEM129A0AVI4 362 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 IRF3Q14653 427 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 ENKURQ8TC29 256 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 LUZP4Q9P127 313 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 KCNG2Q9UJ96 466 aa14.18□□□□□ -0.14
CPSF1-213ENST00000620219 A0A1W2PQD3 144 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 GJE1A6NN92 205 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 SLC15A1P46059 708 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 SLC35A1P78382 337 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 TIGD3Q6B0B8 471 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 TMEM205Q6UW68 189 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 RFLNBQ8N5W9 214 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 ROBO4Q8WZ75 1007 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 EMC7Q9NPA0 242 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 MYEF2Q9P2K5 600 aaKnown RBP14.17□□□□□ -0.14
CPSF1-213ENST00000620219 IGLV3-12A0A075B6K2 115 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 C9orf172C9J069 976 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 ACOT7O00154 380 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 DVL2O14641 736 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 PER3P56645 1201 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 PSPHP78330 225 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 SELENBP1Q13228 472 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 OR1C1Q15619 314 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 LIPNQ5VXI9 398 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 ASB18Q6ZVZ8 466 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 MS4A15Q8N5U1 240 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 PNPLA2Q96AD5 504 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 NDUFB11Q9NX14 153 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 PRSS37A4D1T9 235 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 TO15178 435 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 SLC2A1P11166 492 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 CD40LGP29965 261 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 PPP5CP53041 499 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 GALEQ14376 348 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 HES5Q5TA89 166 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 C5orf46Q6UWT4 87 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 NFAM1Q8NET5 270 aaPredicted RBP14.17□□□□□ -0.14
CPSF1-213ENST00000620219 OR14A2Q96R54 314 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 CMAHPQ9Y471 501 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 IGKV1D-42A0A075B6H8 117 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 PTP4A3O75365 173 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 ZNF12P17014 697 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 MAGEB1P43366 347 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 PPP3R1P63098 170 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 TMPRSS12Q86WS5 348 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 IZUMO1Q8IYV9 350 aa14.17□□□□□ -0.14
CPSF1-213ENST00000620219 ULBP2Q9BZM5 246 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms