RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 BAP18Q8IXM2 172 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 ZNF561Q8N587 486 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 KCNRGQ8N5I3 272 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 OR4S1Q8NGB4 309 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 TFGQ92734 400 aaPredicted RBP8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 FGF11Q92914 225 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 TMEM106AQ96A25 262 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 SLAMF9Q96A28 289 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 FOXRED1Q96CU9 486 aaPredicted RBP8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 HAVCR1Q96D42 359 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 FOXN4Q96NZ1 517 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 TOLLIPQ9H0E2 274 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 UNKLQ9H9P5 680 aaKnown RBP8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 SCN5AQ14524 2016 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 TVP23AA6NH52 213 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 NEDD8-MDP1E9PL57 170 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 GMFGO60234 142 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 LEFTY1O75610 366 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 IFNA6P05013 189 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 ID4P47928 161 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 GPR143P51810 404 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 CASP6P55212 293 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 HTRA4P83105 476 aaPredicted RBP8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 DHRS2Q13268 280 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 RPL22L1Q6P5R6 122 aaKnown RBP8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 UQCC3Q6UW78 93 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 LCTLQ6UWM7 567 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 CLEC9AQ6UXN8 241 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 STAC2Q6ZMT1 411 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 GAREM2Q75VX8 874 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 MTSS1LQ765P7 747 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 ZNF383Q8NA42 475 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 TIFAQ96CG3 184 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 TSSK2Q96PF2 358 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 TAS2R8Q9NYW2 309 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 ZNF281Q9Y2X9 895 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 CSAG2Q9Y5P2 127 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 URGCP-MRPS24S4R325 110 aa8.95□□□□□ -0.98
TNFAIP3-210ENST00000620204 TMEM72A0PK05 275 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 DCDC2BA2VCK2 349 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 CXorf65A6NEN9 183 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 BLOC1S5-TXNDC5H3BN57 136 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 PIN1P1O15428 100 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ST8SIA5O15466 376 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 CCL16O15467 120 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 PCDH8O95206 1070 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 PMP2P02689 132 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ZNF44P15621 663 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 G0S2P27469 103 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 CCKBRP32239 447 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 EFNB2P52799 333 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 SSTP61278 116 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 KIAA0141Q14154 515 aaPredicted RBP8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 EBPQ15125 230 aaKnown RBP8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 FAM129CQ86XR2 697 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ZNF565Q8N9K5 539 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 OR4K17Q8NGC6 315 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 OR5T3Q8NGG3 340 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 SLC25A36Q96CQ1 311 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 RAB3CQ96E17 227 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 PTCHD1Q96NR3 888 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 TIMP4Q99727 224 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 C6orf106Q9H6K1 298 aaPredicted RBP8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 TMEM27Q9HBJ8 222 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ZDHHC4Q9NPG8 344 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 CMC2Q9NRP2 79 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 NCDNQ9UBB6 729 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ICKQ9UPZ9 632 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 SDK1Q7Z5N4 2213 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 MED19A0JLT2 244 aaPredicted RBP8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 RNASEK-C17orf49H0YIS7 233 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 CTDSPLO15194 276 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 LATO43561 262 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 MUC1P15941 1255 aaPredicted RBP8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 BSGP35613 385 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 POU3F4P49335 361 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 VASPP50552 380 aaPredicted RBP8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ACTA2P62736 377 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ACTG2P63267 376 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 MRPS10P82664 201 aaKnown RBP8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ILF3Q12906 894 aaKnown RBP eCLIP8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 OR1Q1Q15612 314 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 SLC35F3Q8IY50 421 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 JAGN1Q8N5M9 183 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 OR5AK2Q8NH90 309 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 SECTM1Q8WVN6 248 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ELF4Q99607 663 aaPredicted RBP8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 SEC16AO15027 2179 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 MYO16Q9Y6X6 1858 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 GRXCR1A8MXD5 290 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ZNF736B4DX44 427 aaPredicted RBP8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 H7C417 338 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 PMS2P2O95744 297 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 RHOP08100 348 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 DPP4P27487 766 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 OR4C11Q6IEV9 310 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ZNF529Q6P280 563 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 SLC36A1Q7Z2H8 476 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 MIB2Q96AX9 1013 aa8.94□□□□□ -0.98
TNFAIP3-210ENST00000620204 ZNF689Q96CS4 500 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms