RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 ENTPD2Q9Y5L3 495 aa3.69□□□□□ -1.82
UBE2D3-233ENST00000618836 STYXL1Q9Y6J8 313 aa3.69□□□□□ -1.82
UBE2D3-233ENST00000618836 TCF20Q9UGU0 1960 aaKnown RBP3.69□□□□□ -1.82
UBE2D3-233ENST00000618836 LOC105371242A0A075B767 164 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 SMCO3A2RU48 225 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 TMEM89A2RUT3 159 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 TMEM233B4DJY2 109 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 M0R143 59 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 SLC28A1O00337 649 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 TCF21O43680 179 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 SNX3O60493 162 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 CTSVO60911 334 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 OR6A2O95222 327 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 TOMM40O96008 361 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 AMY2AP04746 511 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 FURINP09958 794 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 MMP9P14780 707 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 AMY2BP19961 511 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 HOXD9P28356 352 aaPredicted RBP3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 PNPLA4P41247 253 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ABCE1P61221 599 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 IRF9Q00978 393 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 SLC6A3Q01959 620 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ACVR1Q04771 509 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ITPK1Q13572 414 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 LRRC8EQ6NSJ5 796 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 TEX261Q6UWH6 196 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 LCLAT1Q6UWP7 414 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ZNF620Q6ZNG0 422 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 GADL1Q6ZQY3 521 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 PRRT2Q7Z6L0 340 aaPredicted RBP3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ADAT2Q7Z6V5 191 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 YAF2Q8IY57 180 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ZNF595Q8IYB9 648 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 OR6V1Q8N148 313 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 OR5L2Q8NGL0 311 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 OR4Q3Q8NH05 313 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ORAOV1Q8WV07 137 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 TCTEX1D2Q8WW35 142 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 C12orf42Q96LP6 360 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ZFP3Q96NJ6 502 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ATG101Q9BSB4 218 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 WRAP53Q9BUR4 548 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 MS4A8Q9BY19 250 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 HDAC8Q9BY41 377 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 NANOGQ9H9S0 305 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 TAS2R14Q9NYV8 317 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 SEC14L4Q9UDX3 406 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 CD84Q9UIB8 345 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 SLC17A4Q9Y2C5 497 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 MTCH2Q9Y6C9 303 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 U3KQ87 197 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 DENND4AQ7Z401 1863 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 SIPA1L1O43166 1804 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 LOC100289279A0A1B0GTE1 492 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 KBTBD11-OT1A0A1B0GTJ5 212 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 A0A1W2PR48 441 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 CIB4A0PJX0 185 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 CXorf65A6NEN9 183 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 OR5H14A6NHG9 310 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 RGS14O43566 566 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 CDC40O60508 579 aaKnown RBP eCLIP3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 FKBP6O75344 327 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 FGF2P09038 288 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 C8orf88P0DMB2 117 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 HOXB4P17483 251 aaPredicted RBP3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 EDN2P20800 178 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 PTGER1P34995 402 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ECI1P42126 302 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 LGALS4P56470 323 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ZNF616Q08AN1 781 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 RBMS2Q15434 407 aaKnown RBP3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 C6orf52Q5T4I8 152 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 SAMD13Q5VXD3 122 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 LAIR1Q6GTX8 287 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 CAPN13Q6MZZ7 669 aaPredicted RBP3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 TMEM205Q6UW68 189 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 CDHR3Q6ZTQ4 885 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 SHFQ7M4L6 423 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 VRK3Q8IV63 474 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 C10orf107Q8IVU9 208 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 BAP18Q8IXM2 172 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 LYG1Q8N1E2 194 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ATPAF2Q8N5M1 289 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 METTL13Q8N6R0 699 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 ACOT4Q8N9L9 421 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 OR2Z1Q8NG97 314 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 SHKBP1Q8TBC3 707 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 PPP1R13LQ8WUF5 828 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 RNF138Q8WVD3 245 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 HPSE2Q8WWQ2 592 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 FCGR1BQ92637 280 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 RORBQ92753 470 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 SCAMP4Q969E2 229 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 MOCOSQ96EN8 888 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 MUS81Q96NY9 551 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 OR52B2Q96RD2 323 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 PLK3Q9H4B4 646 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 CLMPQ9H6B4 373 aa3.68□□□□□ -1.82
UBE2D3-233ENST00000618836 PTGES2Q9H7Z7 377 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms