RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 NOXRED1Q6NXP6 359 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 ZNF841Q6ZN19 808 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 CREB3L2Q70SY1 520 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 ZNF551Q7Z340 670 aaPredicted RBP5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 GOLGA7Q7Z5G4 137 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 ZC3HC1Q86WB0 502 aaKnown RBP5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 RNF130Q86XS8 419 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 MMGT1Q8N4V1 131 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 OR5R1Q8NH85 324 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 ZNF519Q8TB69 540 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 C10orf82Q8WW14 230 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 C11orf40Q8WZ69 217 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 ST8SIA1Q92185 356 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 RORBQ92753 470 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 ARL8AQ96BM9 186 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 NEIL1Q96FI4 390 aaPredicted RBP5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 C3orf30Q96M34 536 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 AMDHD1Q96NU7 426 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 FRG2BQ96QU4 278 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 TMEM246Q9BRR3 403 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 NAA11Q9BSU3 229 aaPredicted RBP5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 LINC00470Q9BZP3 86 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 MUC13Q9H3R2 512 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 RANBP3Q9H6Z4 567 aaPredicted RBP5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 IPPKQ9H8X2 491 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 ACER3Q9NUN7 267 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 SIRT5Q9NXA8 310 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 GRHL1Q9NZI5 618 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 DNAJB11Q9UBS4 358 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 CLN8Q9UBY8 286 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 TRAPPC4Q9Y296 219 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 MAB21L2Q9Y586 359 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 SMAD5-AS1Q9Y6J3 95 aa5.54□□□□□ -1.52
SCAMP1-206ENST00000618166 DMBT1Q9UGM3 2413 aaPredicted RBP5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 TMEM72A0PK05 275 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 TMEM178BH3BS89 294 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 OR7A17O14581 309 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 EIF1BO60739 113 aaKnown RBP5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 DNAJA2O60884 412 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 RAMP3O60896 148 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 PIAS1O75925 651 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 RAB36O95755 333 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 PDYNP01213 254 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 PRPS2P11908 318 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 MLNP12872 115 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 B4GALT1P15291 398 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 CHN1P15882 459 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 ARL1P40616 181 aaPredicted RBP5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 ARF6P62330 175 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 TRA2BP62995 288 aaKnown RBP5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 TNFAIP6P98066 277 aaPredicted RBP5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 HOXA4Q00056 320 aaPredicted RBP5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 HSPB3Q12988 150 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 METTL11BQ5VVY1 283 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 TTC19Q6DKK2 380 aaPredicted RBP5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 LRFN4Q6PJG9 635 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 SASS6Q6UVJ0 657 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 OLIG3Q7RTU3 272 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 SZRD1Q7Z422 152 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 KDM8Q8N371 416 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 COX18Q8N8Q8 333 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 CPEB3Q8NE35 698 aaKnown RBP5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 C16orf78Q8WTQ4 265 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 CDS1Q92903 461 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 PLEKHA8Q96JA3 519 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 SF3B5Q9BWJ5 86 aaKnown RBP5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 EBPLQ9BY08 206 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 ABHD10Q9NUJ1 306 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 NUDT4Q9NZJ9 180 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 MRPL15Q9P015 296 aaKnown RBP5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 KCNE3Q9Y6H6 103 aa5.53□□□□□ -1.52
SCAMP1-206ENST00000618166 TCRBV4S1A1TA0A5B7 111 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 ZNF99A8MXY4 864 aaPredicted RBP5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 NPIPB9F8W1W9 429 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 H3BNH8 94 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 EIF4E2O60573 245 aaKnown RBP5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 UGDHO60701 494 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 CYB5R3P00387 301 aaPredicted RBP5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 CD55P08174 381 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 UBTFL6P0CB48 400 aaPredicted RBP5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 FAHP16930 419 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 LCN1P31025 176 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 APOBEC1P41238 236 aaKnown RBP5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 FNTAP49354 379 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 POU6F2P78424 691 aaPredicted RBP5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 DLG1Q12959 904 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 KLRD1Q13241 179 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 PMS2P3Q13401 168 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 GTF2H2Q13888 395 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 CEACAM7Q14002 265 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 RBMY1FQ15415 496 aaKnown RBP5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 OR7A5Q15622 319 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 NPTX1Q15818 432 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 VPS26BQ4G0F5 336 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 THEM4Q5T1C6 240 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 PDZK1Q5T2W1 519 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 RNASEH2BQ5TBB1 312 aaKnown RBP5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 GTF2H2CQ6P1K8 395 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 C10orf99Q6UWK7 81 aa5.52□□□□□ -1.53
SCAMP1-206ENST00000618166 VMO1Q7Z5L0 202 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms